RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 C1orf189Q5VU69 101 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 BROXQ5VW32 411 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 C12orf73Q69YU5 71 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 PLEKHM3Q6ZWE6 761 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 OR6T1Q8NGN1 323 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 THAP4Q8WY91 577 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 TMEM234Q8WY98 164 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 TMEM41AQ96HV5 264 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 ZNF570Q96NI8 536 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 GPX7Q96SL4 187 aaPredicted RBP6.6□□□□□ -1.35
NUP43-201ENST00000340413 MYCBPQ99417 103 aaPredicted RBP6.6□□□□□ -1.35
NUP43-201ENST00000340413 FANCFQ9NPI8 374 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 EQTNQ9NQ60 294 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 VNN3Q9NY84 501 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 SELENONQ9NZV5 590 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 WDR87Q6ZQQ6 2873 aa6.6□□□□□ -1.35
NUP43-201ENST00000340413 ZNF208O43345 1280 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 OR6B1O95007 311 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 LIPCP11150 499 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 P2RX1P51575 399 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 EFNA3P52797 238 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 GAS1P54826 345 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 MLF1P58340 268 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 ID2Q02363 134 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 C17orf67Q0P5P2 114 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 CBFBQ13951 182 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 ZNF791Q3KP31 576 aaPredicted RBP6.59□□□□□ -1.35
NUP43-201ENST00000340413 PGBD2Q6P3X8 592 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 GDF7Q7Z4P5 450 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 PPP1R32Q7Z5V6 425 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 VRK2Q86Y07 508 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 OSTF1Q92882 214 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 Q96MT0 163 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 TUBA1CQ9BQE3 449 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 BCL7BQ9BQE9 202 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 JAM3Q9BX67 310 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 TMEM121BQ9BXQ6 578 aaPredicted RBP6.59□□□□□ -1.35
NUP43-201ENST00000340413 NXF5Q9H1B4 397 aaKnown RBP6.59□□□□□ -1.35
NUP43-201ENST00000340413 FN3KQ9H479 309 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 SYNDIG1Q9H7V2 258 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 APMAPQ9HDC9 416 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 NTNG1Q9Y2I2 539 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 PCDHGB1Q9Y5G3 927 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 NPFFR2Q9Y5X5 522 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 HS3ST3B1Q9Y662 390 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 ARID1BQ8NFD5 2236 aaPredicted RBP6.59□□□□□ -1.35
NUP43-201ENST00000340413 LOC100130705A0A1B0GUX0 176 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 hCG_2039718K7EN88 272 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 MT-ATP6P00846 226 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 CCL4P13236 92 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 ZNF17P17021 662 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 ELK4P28324 431 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 NPRL3Q12980 569 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 OCLNQ16625 522 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 ASB18Q6ZVZ8 466 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 SLC5A8Q8N695 610 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 POGLUT1Q8NBL1 392 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 OR5W2Q8NH69 310 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 MAGED4Q96JG8 741 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 FER1L6-AS2Q96M78 137 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 SEMA6AQ9H2E6 1030 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 SMOC1Q9H4F8 434 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 MYOTQ9UBF9 498 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 KCNE5Q9UJ90 142 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 TPST1O60507 370 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 FCMRO60667 390 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 SNX4O95219 450 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 ZNF28P17035 718 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 ABCD3P28288 659 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 RBMS1P29558 406 aaKnown RBP6.59□□□□□ -1.35
NUP43-201ENST00000340413 ETV5P41161 510 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 RRADP55042 308 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 CDH12P55289 794 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 MVKQ03426 396 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 BLMHQ13867 455 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 SEC23BQ15437 767 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 OR1Q1Q15612 314 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 BORAQ6PGQ7 559 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 TMEM179BQ7Z7N9 219 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 CDK20Q8IZL9 346 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 GALNT6Q8NCL4 622 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 OR4D11Q8NGI4 311 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 PIK3R3Q92569 461 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 PRSS27Q9BQR3 290 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 OR8D2Q9GZM6 311 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 TOR3AQ9H497 397 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 MRPS18AQ9NVS2 196 aaKnown RBP6.59□□□□□ -1.35
NUP43-201ENST00000340413 CNOT2Q9NZN8 540 aaKnown RBP6.59□□□□□ -1.35
NUP43-201ENST00000340413 REV1Q9UBZ9 1251 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 MYRFQ9Y2G1 1151 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 PTRH2Q9Y3E5 179 aaKnown RBP6.59□□□□□ -1.35
NUP43-201ENST00000340413 SPIN1Q9Y657 262 aaPredicted RBP6.59□□□□□ -1.35
NUP43-201ENST00000340413 FER1L5A0AVI2 2057 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 SPTBN2O15020 2390 aa6.59□□□□□ -1.35
NUP43-201ENST00000340413 PTPRBP23467 1997 aa6.58□□□□□ -1.36
NUP43-201ENST00000340413 A0A087WUJ7 227 aa6.58□□□□□ -1.36
NUP43-201ENST00000340413 TMEM200CA6NKL6 621 aa6.58□□□□□ -1.36
NUP43-201ENST00000340413 SNTNA6NMZ2 147 aa6.58□□□□□ -1.36
NUP43-201ENST00000340413 DNPH1O43598 174 aa6.58□□□□□ -1.36
NUP43-201ENST00000340413 AHCYL1O43865 530 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms