RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 TRAV6A0A075B6T7 132 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 GABRG2P18507 467 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 ATF4P18848 351 aaPredicted RBP17.49■□□□□ 0.39
PSPC1-201ENST00000338910 CELP19835 753 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 PCBP4P57723 403 aaKnown RBP17.49■□□□□ 0.39
PSPC1-201ENST00000338910 LGALSLQ3ZCW2 172 aaPredicted RBP17.49■□□□□ 0.39
PSPC1-201ENST00000338910 EOGTQ5NDL2 527 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 NDUFAF5Q5TEU4 345 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 FAM122CQ6P4D5 195 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 PRICKLE2Q7Z3G6 844 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 PCNPQ8WW12 178 aaKnown RBP17.49■□□□□ 0.39
PSPC1-201ENST00000338910 HMGB4Q8WW32 186 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 ACOT12Q8WYK0 555 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 GPR52Q9Y2T5 361 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 COLEC10Q9Y6Z7 277 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 KNL1Q8NG31 2342 aa17.49■□□□□ 0.39
PSPC1-201ENST00000338910 A0A0A6YYD5 115 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 A8MUA0 341 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 C4orf51C9J302 202 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 ERI3O43414 337 aaKnown RBP17.48■□□□□ 0.39
PSPC1-201ENST00000338910 B4GALT2O60909 372 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 HSF2Q03933 536 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 ZNF155Q12901 538 aaPredicted RBP17.48■□□□□ 0.39
PSPC1-201ENST00000338910 VASNQ6EMK4 673 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 C6orf120Q7Z4R8 191 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 PRSS42Q7Z5A4 293 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 GPAT4Q86UL3 456 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 NR2C2APQ86WQ0 139 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 OR8K5Q8NH50 307 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 LCN9Q8WX39 176 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 TMEM168Q9H0V1 697 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 SYNPO2LQ9H987 977 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 ADAM29Q9UKF5 820 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 MMP17Q9ULZ9 603 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 CACNG2Q9Y698 323 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 PTGER1P34995 402 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 ENTPD8Q5MY95 495 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 B3GLCTQ6Y288 498 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 PLEKHM3Q6ZWE6 761 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 C16orf62Q7Z3J2 963 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 SZRD1Q7Z422 152 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 COMTD1Q86VU5 262 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 ADGRG3Q86Y34 549 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 BMPERQ8N8U9 685 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 TTLQ8NG68 377 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 OR6C4Q8NGE1 309 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 OR5M3Q8NGP4 307 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 HSD17B8Q92506 261 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 RBP7Q96R05 134 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 OR51J1Q9H342 316 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 SIRT3Q9NTG7 399 aaPredicted RBP17.48■□□□□ 0.39
PSPC1-201ENST00000338910 MAN2C1Q9NTJ4 1040 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 CBLCQ9ULV8 474 aa17.48■□□□□ 0.39
PSPC1-201ENST00000338910 GON4LQ3T8J9 2241 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 CD8B2A6NJW9 211 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 MBTPS2O43462 519 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 CD8BP10966 210 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 NFATC4Q14934 902 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 NTRK2Q16620 822 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 C1orf94Q6P1W5 598 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 Q6ZS52 159 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 MRGPREQ86SM8 312 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 LUZP2Q86TE4 346 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 IQCHQ86VS3 1027 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 LRRC28Q86X40 367 aaPredicted RBP17.47■□□□□ 0.39
PSPC1-201ENST00000338910 ASB12Q8WXK4 309 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 MS4A6EQ96DS6 147 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 OR2M2Q96R28 347 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 CLEC4MQ9H2X3 399 aaPredicted RBP17.47■□□□□ 0.39
PSPC1-201ENST00000338910 PRO3102Q9H379 93 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 ENAMQ9NRM1 1142 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 UCKL1Q9NWZ5 548 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 ZNF624Q9P2J8 865 aaPredicted RBP17.47■□□□□ 0.39
PSPC1-201ENST00000338910 UBQLN2Q9UHD9 624 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 SNRNP200O75643 2136 aaKnown RBP17.47■□□□□ 0.39
PSPC1-201ENST00000338910 TBX19O60806 448 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 RASGRP1O95267 797 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 AHCYP23526 432 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 ACTR1BP42025 376 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 RAB8AP61006 207 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 ACTR1AP61163 376 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 ACSM1Q08AH1 577 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 CAMK2DQ13557 499 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 ZIC1Q15915 447 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 POGLUT1Q8NBL1 392 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 MORN4Q8NDC4 146 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 WDR92Q96MX6 357 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 FCRL4Q96PJ5 515 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 EGLN3Q9H6Z9 239 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 ERVMER34-1Q9H9K5 563 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 ASB6Q9NWX5 421 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 HEBP2Q9Y5Z4 205 aa17.47■□□□□ 0.39
PSPC1-201ENST00000338910 KDM4EB2RXH2 506 aaPredicted RBP17.46■□□□□ 0.39
PSPC1-201ENST00000338910 DVL2O14641 736 aa17.46■□□□□ 0.39
PSPC1-201ENST00000338910 HOXD4P09016 255 aaPredicted RBP17.46■□□□□ 0.39
PSPC1-201ENST00000338910 CMPK1P30085 196 aa17.46■□□□□ 0.39
PSPC1-201ENST00000338910 SSTR2P30874 369 aa17.46■□□□□ 0.39
PSPC1-201ENST00000338910 CCT3P49368 545 aaKnown RBP17.46■□□□□ 0.39
PSPC1-201ENST00000338910 ZNF81P51508 661 aa17.46■□□□□ 0.39
PSPC1-201ENST00000338910 KIAA1024LP59773 190 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms