RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 SLC26A1Q9H2B4 701 aa14.99□□□□□ -0.01
HPS1-202ENST00000338546 C11orf16Q9NQ32 467 aa14.99□□□□□ -0.01
HPS1-202ENST00000338546 ZNF223Q9UK11 482 aaPredicted RBP14.99□□□□□ -0.01
HPS1-202ENST00000338546 NTNG1Q9Y2I2 539 aa14.99□□□□□ -0.01
HPS1-202ENST00000338546 NCOR1O75376 2440 aa14.99□□□□□ -0.01
HPS1-202ENST00000338546 C2orf92A0A1B0GVN3 265 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 VSTM2BA6NLU5 285 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 VGLL3A8MV65 326 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 AHCYL1O43865 530 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 MT-ND2P03891 347 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 ACP1P24666 158 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 CSTF2P33240 577 aaKnown RBP eCLIP14.98□□□□□ -0.01
HPS1-202ENST00000338546 MPLP40238 635 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 PIGFQ07326 219 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 ZFP36L1Q07352 338 aaKnown RBP14.98□□□□□ -0.01
HPS1-202ENST00000338546 EBPQ15125 230 aaKnown RBP14.98□□□□□ -0.01
HPS1-202ENST00000338546 ANGPT1Q15389 498 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 TBCEQ15813 527 aaPredicted RBP14.98□□□□□ -0.01
HPS1-202ENST00000338546 UBE2UQ5VVX9 321 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 HLA-DQA1Q5Y7H0 255 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 ZNF385CQ66K41 422 aaPredicted RBP14.98□□□□□ -0.01
HPS1-202ENST00000338546 PWWP2BQ6NUJ5 590 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 ULK3Q6PHR2 472 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 AHSA2Q719I0 299 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 KIF18BQ86Y91 864 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 SLC43A2Q8N370 569 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 FAM71CQ8NEG0 241 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 OR2I1PQ8NGU4 316 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 RAB2BQ8WUD1 216 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 TMEM255BQ8WV15 326 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 CLIP3Q96DZ5 547 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 FAM46AQ96IP4 442 aaKnown RBP14.98□□□□□ -0.01
HPS1-202ENST00000338546 SLC38A2Q96QD8 506 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 ZNF426Q9BUY5 554 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 NUDT9Q9BW91 350 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 GTPBP2Q9BX10 602 aaKnown RBP14.98□□□□□ -0.01
HPS1-202ENST00000338546 ACOT13Q9NPJ3 140 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 EXOSC3Q9NQT5 275 aaKnown RBP14.98□□□□□ -0.01
HPS1-202ENST00000338546 MED17Q9NVC6 651 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 CTSFQ9UBX1 484 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 PPIEQ9UNP9 301 aaKnown RBP14.98□□□□□ -0.01
HPS1-202ENST00000338546 RPL36Q9Y3U8 105 aaKnown RBP14.98□□□□□ -0.01
HPS1-202ENST00000338546 FER1L5A0AVI2 2057 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 SNTNA6NMZ2 147 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 NGFRP08138 427 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 TBXA2RP21731 343 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 AVPR2P30518 371 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 SLC5A2P31639 672 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 SLC15A1P46059 708 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 EFNA3P52797 238 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 LSM11P83369 360 aaKnown RBP eCLIP14.98□□□□□ -0.01
HPS1-202ENST00000338546 LSAMPQ13449 338 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 TMEM44Q2T9K0 475 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 PHF19Q5T6S3 580 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 GPR107Q5VW38 600 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 TMPRSS11FQ6ZWK6 438 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 SLC29A4Q7RTT9 530 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 ZNF614Q8N883 585 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 AGBL5Q8NDL9 886 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 DNAJA4Q8WW22 397 aaPredicted RBP14.98□□□□□ -0.01
HPS1-202ENST00000338546 CRELD1Q96HD1 420 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 CDCA4Q9BXL8 241 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 NXF5Q9H1B4 397 aaKnown RBP14.98□□□□□ -0.01
HPS1-202ENST00000338546 SYNDIG1Q9H7V2 258 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 MED31Q9Y3C7 131 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 CDH10Q9Y6N8 788 aa14.98□□□□□ -0.01
HPS1-202ENST00000338546 A8MUA0 341 aa14.97□□□□□ -0.01
HPS1-202ENST00000338546 LDOC1O95751 146 aaPredicted RBP14.97□□□□□ -0.01
HPS1-202ENST00000338546 CSTAP01040 98 aa14.97□□□□□ -0.01
HPS1-202ENST00000338546 HMGN1P05114 100 aa14.97□□□□□ -0.01
HPS1-202ENST00000338546 IGFBP1P08833 259 aaPredicted RBP14.97□□□□□ -0.01
HPS1-202ENST00000338546 PAX7P23759 505 aa14.97□□□□□ -0.01
HPS1-202ENST00000338546 ST13P50502 369 aaKnown RBP14.97□□□□□ -0.01
HPS1-202ENST00000338546 GPR143P51810 404 aa14.97□□□□□ -0.01
HPS1-202ENST00000338546 FNDC7Q5VTL7 733 aa14.97□□□□□ -0.01
HPS1-202ENST00000338546 RNLSQ5VYX0 342 aa14.97□□□□□ -0.01
HPS1-202ENST00000338546 LINC00114Q6XXX2 140 aa14.97□□□□□ -0.01
HPS1-202ENST00000338546 ZNF620Q6ZNG0 422 aa14.97□□□□□ -0.01
HPS1-202ENST00000338546 LAPTM4BQ86VI4 370 aa14.97□□□□□ -0.01
HPS1-202ENST00000338546 GALNT15Q8N3T1 639 aa14.97□□□□□ -0.01
HPS1-202ENST00000338546 STX19Q8N4C7 294 aa14.97□□□□□ -0.01
HPS1-202ENST00000338546 ZNF321PQ8N8H1 164 aa14.97□□□□□ -0.01
HPS1-202ENST00000338546 ZNF441Q8N8Z8 693 aa14.97□□□□□ -0.01
HPS1-202ENST00000338546 SLC38A9Q8NBW4 561 aa14.97□□□□□ -0.01
HPS1-202ENST00000338546 OR4C3Q8NH37 302 aa14.97□□□□□ -0.01
HPS1-202ENST00000338546 BRIX1Q8TDN6 353 aaKnown RBP14.97□□□□□ -0.01
HPS1-202ENST00000338546 TP53INP1Q96A56 240 aa14.97□□□□□ -0.01
HPS1-202ENST00000338546 C12orf43Q96C57 262 aaKnown RBP14.97□□□□□ -0.01
HPS1-202ENST00000338546 LRFN5Q96NI6 719 aa14.97□□□□□ -0.01
HPS1-202ENST00000338546 SEMA4CQ9C0C4 833 aa14.97□□□□□ -0.01
HPS1-202ENST00000338546 TVP23BQ9NYZ1 205 aa14.97□□□□□ -0.01
HPS1-202ENST00000338546 SELENONQ9NZV5 590 aa14.97□□□□□ -0.01
HPS1-202ENST00000338546 CNIH4Q9P003 139 aa14.97□□□□□ -0.01
HPS1-202ENST00000338546 A0A1B0GWA3 101 aa14.96□□□□□ -0.01
HPS1-202ENST00000338546 IRGMA1A4Y4 181 aa14.96□□□□□ -0.01
HPS1-202ENST00000338546 SCDO00767 359 aa14.96□□□□□ -0.01
HPS1-202ENST00000338546 FLRT2O43155 660 aa14.96□□□□□ -0.01
HPS1-202ENST00000338546 CPNE3O75131 537 aaKnown RBP14.96□□□□□ -0.01
HPS1-202ENST00000338546 ALOX12BO75342 701 aa14.96□□□□□ -0.01
HPS1-202ENST00000338546 BCAS1O75363 584 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms