RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 ZBTB18Q99592 522 aa13.77□□□□□ -0.21
PRKN-201ENST00000338468 ZNF350Q9GZX5 532 aa13.77□□□□□ -0.21
PRKN-201ENST00000338468 MED17Q9NVC6 651 aa13.77□□□□□ -0.21
PRKN-201ENST00000338468 VDAC3Q9Y277 283 aa13.77□□□□□ -0.21
PRKN-201ENST00000338468 INTS1Q8N201 2190 aaKnown RBP13.76□□□□□ -0.21
PRKN-201ENST00000338468 A0A087WZY1 265 aa13.76□□□□□ -0.21
PRKN-201ENST00000338468 C7orf72A4D263 438 aa13.76□□□□□ -0.21
PRKN-201ENST00000338468 HMGN4O00479 90 aa13.76□□□□□ -0.21
PRKN-201ENST00000338468 TNFRSF21O75509 655 aa13.76□□□□□ -0.21
PRKN-201ENST00000338468 TGM6O95932 706 aa13.76□□□□□ -0.21
PRKN-201ENST00000338468 AK1P00568 194 aa13.76□□□□□ -0.21
PRKN-201ENST00000338468 IL6P05231 212 aa13.76□□□□□ -0.21
PRKN-201ENST00000338468 PEPDP12955 493 aa13.76□□□□□ -0.21
PRKN-201ENST00000338468 MRPL19P49406 292 aaKnown RBP13.76□□□□□ -0.21
PRKN-201ENST00000338468 DLX5P56178 289 aa13.76□□□□□ -0.21
PRKN-201ENST00000338468 FOXF2Q12947 444 aa13.76□□□□□ -0.21
PRKN-201ENST00000338468 ZNF141Q15928 474 aa13.76□□□□□ -0.21
PRKN-201ENST00000338468 PLPPR5Q32ZL2 321 aa13.76□□□□□ -0.21
PRKN-201ENST00000338468 NDUFAF6Q330K2 333 aa13.76□□□□□ -0.21
PRKN-201ENST00000338468 MEX3BQ6ZN04 569 aaKnown RBP13.76□□□□□ -0.21
PRKN-201ENST00000338468 MTERF4Q7Z6M4 381 aaKnown RBP13.76□□□□□ -0.21
PRKN-201ENST00000338468 GGNQ86UU5 652 aa13.76□□□□□ -0.21
PRKN-201ENST00000338468 UBQLNLQ8IYU4 475 aa13.76□□□□□ -0.21
PRKN-201ENST00000338468 B4GALNT2Q8NHY0 566 aa13.76□□□□□ -0.21
PRKN-201ENST00000338468 PHOSPHO1Q8TCT1 267 aa13.76□□□□□ -0.21
PRKN-201ENST00000338468 DYDC1Q8WWB3 177 aa13.76□□□□□ -0.21
PRKN-201ENST00000338468 XAGE5Q8WWM1 108 aa13.76□□□□□ -0.21
PRKN-201ENST00000338468 MAGEB18Q96M61 343 aa13.76□□□□□ -0.21
PRKN-201ENST00000338468 PIGQQ9BRB3 760 aa13.76□□□□□ -0.21
PRKN-201ENST00000338468 NMUR2Q9GZQ4 415 aa13.76□□□□□ -0.21
PRKN-201ENST00000338468 TCF7L2Q9NQB0 619 aa13.76□□□□□ -0.21
PRKN-201ENST00000338468 ZNF629Q9UEG4 869 aaPredicted RBP13.76□□□□□ -0.21
PRKN-201ENST00000338468 MKLN1Q9UL63 735 aa13.76□□□□□ -0.21
PRKN-201ENST00000338468 ICAM5Q9UMF0 924 aa13.76□□□□□ -0.21
PRKN-201ENST00000338468 CARD8Q9Y2G2 431 aa13.76□□□□□ -0.21
PRKN-201ENST00000338468 DTNAQ9Y4J8 743 aa13.76□□□□□ -0.21
PRKN-201ENST00000338468 H3BML4 177 aa13.75□□□□□ -0.21
PRKN-201ENST00000338468 LINC01387J3KSC0 135 aa13.75□□□□□ -0.21
PRKN-201ENST00000338468 KIAA0513O60268 411 aa13.75□□□□□ -0.21
PRKN-201ENST00000338468 STX11O75558 287 aa13.75□□□□□ -0.21
PRKN-201ENST00000338468 UGT2B17O75795 530 aa13.75□□□□□ -0.21
PRKN-201ENST00000338468 IL2RAP01589 272 aa13.75□□□□□ -0.21
PRKN-201ENST00000338468 GUSBP08236 651 aa13.75□□□□□ -0.21
PRKN-201ENST00000338468 LINGO3P0C6S8 592 aa13.75□□□□□ -0.21
PRKN-201ENST00000338468 ZNF17P17021 662 aa13.75□□□□□ -0.21
PRKN-201ENST00000338468 BMP5P22003 454 aa13.75□□□□□ -0.21
PRKN-201ENST00000338468 CHI3L1P36222 383 aaPredicted RBP13.75□□□□□ -0.21
PRKN-201ENST00000338468 POLR2JP52435 117 aaKnown RBP13.75□□□□□ -0.21
PRKN-201ENST00000338468 AGFG1P52594 562 aaKnown RBP13.75□□□□□ -0.21
PRKN-201ENST00000338468 MVDP53602 400 aa13.75□□□□□ -0.21
PRKN-201ENST00000338468 AQP5P55064 265 aa13.75□□□□□ -0.21
PRKN-201ENST00000338468 MAPK14Q16539 360 aa13.75□□□□□ -0.21
PRKN-201ENST00000338468 COX20Q5RI15 118 aa13.75□□□□□ -0.21
PRKN-201ENST00000338468 PDZK1Q5T2W1 519 aa13.75□□□□□ -0.21
PRKN-201ENST00000338468 TYW3Q6IPR3 259 aaKnown RBP13.75□□□□□ -0.21
PRKN-201ENST00000338468 ZNF621Q6ZSS3 439 aa13.75□□□□□ -0.21
PRKN-201ENST00000338468 RNF130Q86XS8 419 aa13.75□□□□□ -0.21
PRKN-201ENST00000338468 DMRTC2Q8IXT2 367 aaPredicted RBP13.75□□□□□ -0.21
PRKN-201ENST00000338468 MIER2Q8N344 545 aa13.75□□□□□ -0.21
PRKN-201ENST00000338468 GTPBP8Q8N3Z3 284 aaPredicted RBP13.75□□□□□ -0.21
PRKN-201ENST00000338468 ZNF527Q8NB42 609 aa13.75□□□□□ -0.21
PRKN-201ENST00000338468 WNT2BQ93097 391 aa13.75□□□□□ -0.21
PRKN-201ENST00000338468 VPS33AQ96AX1 596 aa13.75□□□□□ -0.21
PRKN-201ENST00000338468 CCDC28BQ9BUN5 200 aa13.75□□□□□ -0.21
PRKN-201ENST00000338468 SAP130Q9H0E3 1048 aa13.75□□□□□ -0.21
PRKN-201ENST00000338468 HHATLQ9HCP6 504 aa13.75□□□□□ -0.21
PRKN-201ENST00000338468 AP4B1Q9Y6B7 739 aa13.75□□□□□ -0.21
PRKN-201ENST00000338468 SERINC4A6NH21 518 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 RFXANKO14593 260 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 SEC14L5O43304 696 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 RCBTB2O95199 551 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 AGR2O95994 175 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 CD1EP15812 388 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 IL11P20809 199 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 CTSSP25774 331 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 KHKP50053 298 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 LRRC74AQ0VAA2 488 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 GPR68Q15743 365 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 MAPK11Q15759 364 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 TOMM34Q15785 309 aaPredicted RBP13.74□□□□□ -0.21
PRKN-201ENST00000338468 GTDC1Q4AE62 458 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 TIGD2Q4W5G0 525 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 DNAJC14Q6Y2X3 702 aaPredicted RBP13.74□□□□□ -0.21
PRKN-201ENST00000338468 FRRS1Q6ZNA5 592 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 MSANTD1Q6ZTZ1 278 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 C16orf62Q7Z3J2 963 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 MED12LQ86YW9 2145 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 FUNDC1Q8IVP5 155 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 MEIOBQ8N635 442 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 PNPT1Q8TCS8 783 aaKnown RBP13.74□□□□□ -0.21
PRKN-201ENST00000338468 ZFP90Q8TF47 636 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 FIG4Q92562 907 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 ZBTB8AQ96BR9 441 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 ROPN1LQ96C74 230 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 ZG16BQ96DA0 208 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 C14orf79Q96F83 325 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 ZNF845Q96IR2 970 aaPredicted RBP13.74□□□□□ -0.21
PRKN-201ENST00000338468 ADGRG7Q96K78 797 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 RNF145Q96MT1 663 aa13.74□□□□□ -0.21
PRKN-201ENST00000338468 EXD2Q9NVH0 621 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms