RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 MTFR2Q6P444 385 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 RAB42Q8N4Z0 105 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 C17orf47Q8NEP4 570 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 ZC3HAV1LQ96H79 300 aaKnown RBP11.45□□□□□ -0.58
VPS33B-201ENST00000333371 PRSS27Q9BQR3 290 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 SLC28A3Q9HAS3 691 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 ENAMQ9NRM1 1142 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 KLHL28Q9NXS3 571 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 RASD1Q9Y272 281 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 WDR45Q9Y484 360 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 MPDZO75970 2070 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 CACNA1IQ9P0X4 2223 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 J3QRE1 110 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 EEF1E1O43324 174 aaKnown RBP11.45□□□□□ -0.58
VPS33B-201ENST00000333371 PRICKLE3O43900 615 aaPredicted RBP11.45□□□□□ -0.58
VPS33B-201ENST00000333371 OR2B3O76000 313 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 PAICSP22234 425 aaKnown RBP11.45□□□□□ -0.58
VPS33B-201ENST00000333371 ERP29P30040 261 aaKnown RBP11.45□□□□□ -0.58
VPS33B-201ENST00000333371 HCCSP53701 268 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 SLC25A35Q3KQZ1 300 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 TRMT12Q53H54 448 aaKnown RBP11.45□□□□□ -0.58
VPS33B-201ENST00000333371 BCL2L15Q5TBC7 163 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 FAM205BPQ63HN1 556 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 MZT2AQ6P582 158 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 KRT74Q7RTS7 529 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 TIGD4Q8IY51 512 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 GPR135Q8IZ08 494 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 HDDC3Q8N4P3 179 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 OR7G1Q8NGA0 311 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 OR52N1Q8NH53 320 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 PITHD1Q9GZP4 211 aaPredicted RBP11.45□□□□□ -0.58
VPS33B-201ENST00000333371 CCDC86Q9H6F5 360 aaKnown RBP11.45□□□□□ -0.58
VPS33B-201ENST00000333371 KLHL1Q9NR64 748 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 KLHL21Q9UJP4 597 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 CACNA1CQ13936 2221 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 PEX12O00623 359 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 CHST10O43529 356 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 RGS9O75916 674 aaPredicted RBP11.45□□□□□ -0.58
VPS33B-201ENST00000333371 C1QBP02746 253 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 CEACAM5P06731 702 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 IL9P15248 144 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 PRKAR1BP31321 381 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 SEC13P55735 322 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 GNG2P59768 71 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 ADAM15Q13444 863 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 MFSD12Q6NUT3 480 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 NIPAL3Q6P499 406 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 VN1R4Q7Z5H5 301 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 PEX5LQ8IYB4 626 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 RFLNBQ8N5W9 214 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 ACBD7Q8N6N7 88 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 TTLQ8NG68 377 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 FANK1Q8TC84 345 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 C10orf90Q96M02 699 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 ABHD1Q96SE0 405 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 CAPN10Q9HC96 672 aa11.45□□□□□ -0.58
VPS33B-201ENST00000333371 TRAV27A0A087WT01 109 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 A0A0A6YYJ9 748 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 DAPL1A0PJW8 107 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 LINC01565O15544 149 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 ORC5O43913 435 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 TEAD1P28347 426 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 IFNA8P32881 189 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 THBS2P35442 1172 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 RFX3P48380 749 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 FCN2Q15485 313 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 ITPRIPL2Q3MIP1 535 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 DEFB134Q4QY38 66 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 C2orf27AQ580R0 203 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 ESPNLQ6ZVH7 1005 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 OR13C2Q8NGS9 318 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 PTP4A1Q93096 173 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 KISS1RQ969F8 398 aaPredicted RBP11.44□□□□□ -0.58
VPS33B-201ENST00000333371 MYADMQ96S97 322 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 THAP7Q9BT49 309 aaPredicted RBP11.44□□□□□ -0.58
VPS33B-201ENST00000333371 ABCG5Q9H222 651 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 ADAP2Q9NPF8 381 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 BABAM2Q9NXR7 383 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 SLC23A1Q9UHI7 598 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 KCNE5Q9UJ90 142 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 POLHQ9Y253 713 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 SGK494L7N484 410 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 ADH1BP00325 375 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 METAP1DQ6UB28 335 aaPredicted RBP11.44□□□□□ -0.58
VPS33B-201ENST00000333371 MTSS1LQ765P7 747 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 OR51A7Q8NH64 312 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 OR5W2Q8NH69 310 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 HSD17B8Q92506 261 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 PHF21AQ96BD5 680 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 ASB6Q9NWX5 421 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 SIDT1Q9NXL6 827 aaKnown RBP11.44□□□□□ -0.58
VPS33B-201ENST00000333371 ING3Q9NXR8 418 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 ZMIZ1Q9ULJ6 1067 aa11.44□□□□□ -0.58
VPS33B-201ENST00000333371 HEATR5AQ86XA9 2040 aa11.43□□□□□ -0.58
VPS33B-201ENST00000333371 EPOPA6NHQ4 379 aa11.43□□□□□ -0.58
VPS33B-201ENST00000333371 UNC119BA6NIH7 251 aa11.43□□□□□ -0.58
VPS33B-201ENST00000333371 J3QLW9 94 aa11.43□□□□□ -0.58
VPS33B-201ENST00000333371 MEN1O00255 615 aa11.43□□□□□ -0.58
VPS33B-201ENST00000333371 FABP7O15540 132 aa11.43□□□□□ -0.58
VPS33B-201ENST00000333371 LDB3O75112 727 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms