RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 C9orf50Q5SZB4 431 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 MRGPREQ86SM8 312 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 NOXA1Q86UR1 476 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 PAQR7Q86WK9 346 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 RDH10Q8IZV5 341 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 PATE1Q8WXA2 126 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 C10orf90Q96M02 699 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 RBCK1Q9BYM8 510 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 KRCC1Q9NPI7 259 aaPredicted RBP13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 CD93Q9NPY3 652 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 A0A0G2JMP0 313 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 A0A0X1KG70 313 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 OR6C74A6NCV1 312 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 SMLR1H3BR10 107 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 GTPBP1O00178 669 aaKnown RBP13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 PLOD3O60568 738 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 KCNJ13O60928 360 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 RPS15AP62244 130 aaKnown RBP13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 OR1Q1Q15612 314 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 SNAP47Q5SQN1 464 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 RPTNQ6XPR3 784 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 TMEM91Q6ZNR0 172 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 ZNF485Q8NCK3 441 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 OR4M2Q8NGB6 313 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 TMEM239Q8WW34 195 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 OR6C2Q9NZP2 312 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 MRPS7Q9Y2R9 242 aaKnown RBP13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 ALG5Q9Y673 324 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 CPNE3O75131 537 aaKnown RBP13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 ELK1P19419 428 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 ADPRHP54922 357 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 ZNF761Q86XN6 746 aaPredicted RBP13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 CDK20Q8IZL9 346 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 FAM181AQ8N9Y4 354 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 PPP1R3EQ9H7J1 279 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 TRPV4Q9HBA0 871 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 ISYNA1Q9NPH2 558 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 FBXL4Q9UKA2 621 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 TRAPPC13A5PLN9 417 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 E9PI62 339 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 MAGEB4O15481 346 aaPredicted RBP13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 RNF13O43567 381 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 TBXA2RP21731 343 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 HTR2AP28223 471 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 GABRA3P34903 492 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 OR10A3P58181 314 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 CDK10Q15131 360 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 THSD4Q6ZMP0 1018 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 KRT74Q7RTS7 529 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 ZNF438Q7Z4V0 828 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 ARIH2OSQ8N7S6 290 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 YIPF7Q8N8F6 280 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 SAMD12Q8N8I0 201 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 OR51L1Q8NGJ5 315 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 NR4A3Q92570 626 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 FGF14Q92915 247 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 MYADMQ96S97 322 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 BABAM2Q9NXR7 383 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 PAHP00439 452 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 YES1P07947 543 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 CPMP14384 443 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 NDUFS1P28331 727 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 ZNF136P52737 540 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 SNRPD2P62316 118 aaKnown RBP13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 SHC2P98077 582 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 DCST2Q5T1A1 773 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 CD200R1LQ6Q8B3 271 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 RIPOR3Q96MK2 946 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 HS6ST2Q96MM7 605 aa13.05□□□□□ -0.32
ATP2C1-201ENST00000328560 NUP210Q8TEM1 1887 aaPredicted RBP13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 PRR23D1E9PI22 279 aaPredicted RBP13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 STX11O75558 287 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 PRR23D2P0DMB1 279 aaPredicted RBP13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 SPTBP11277 2137 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 SDHBP21912 280 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 PBX2P40425 430 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 TMEM44Q2T9K0 475 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 EOGTQ5NDL2 527 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 PRPF38BQ5VTL8 546 aaKnown RBP13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 SFTPA2Q8IWL1 248 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 FRMD1Q8N878 549 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 LILRB4Q8NHJ6 448 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 PPIL3Q9H2H8 161 aaKnown RBP13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 ANKRD19PQ9H560 264 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 RPRD1BQ9NQG5 326 aaKnown RBP13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 RBFOX1Q9NWB1 397 aaKnown RBP13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 PHF11Q9UIL8 331 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 MSRAQ9UJ68 235 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 DAPP1Q9UN19 280 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 GXYLT2A0PJZ3 443 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 FAM86C2PA6NEL3 165 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 SERPINI2O75830 405 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 RGS9O75916 674 aaPredicted RBP13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 NAT1P18440 290 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 TALDO1P37837 337 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 E2F1Q01094 437 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 VASNQ6EMK4 673 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 FIGLAQ6QHK4 219 aa13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 MEPCEQ7L2J0 689 aaKnown RBP13.04□□□□□ -0.32
ATP2C1-201ENST00000328560 NR2C2APQ86WQ0 139 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms