RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 FAM198BQ6UWH4 519 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 BPHLQ86WA6 291 aaPredicted RBP14.29□□□□□ -0.12
VARS2-201ENST00000321897 PROKR2Q8NFJ6 384 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 SPPL3Q8TCT6 385 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 ZMYND19Q96E35 227 aaPredicted RBP14.29□□□□□ -0.12
VARS2-201ENST00000321897 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.29□□□□□ -0.12
VARS2-201ENST00000321897 EXO5Q9H790 373 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 DDX31Q9H8H2 851 aaKnown RBP14.29□□□□□ -0.12
VARS2-201ENST00000321897 TAAR2Q9P1P5 351 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 ZNF705EA8MWA4 302 aaPredicted RBP14.29□□□□□ -0.12
VARS2-201ENST00000321897 SGK494L7N484 410 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 C1QBP02746 253 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 EIF4EBP2Q13542 120 aaPredicted RBP14.29□□□□□ -0.12
VARS2-201ENST00000321897 MEDAGQ5VYS4 303 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 METTL2BQ6P1Q9 378 aaKnown RBP14.29□□□□□ -0.12
VARS2-201ENST00000321897 LYPD4Q6UWN0 246 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 NRROSQ86YC3 692 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 AMER3Q8N944 861 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 CAMKVQ8NCB2 501 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 ZNF680Q8NEM1 530 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 GIMAP1Q8WWP7 306 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 SMPDL3BQ92485 455 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 ZNF354BQ96LW1 612 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 TMEM168Q9H0V1 697 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 TMEM5Q9Y2B1 443 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 TCRBV21S2A2A0A5A6 115 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 CCDC85CA6NKD9 419 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 LGALS8O00214 317 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 UGDHO60701 494 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 SLC19A2O60779 497 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 IL1AP01583 271 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 FBXO45P0C2W1 286 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 AKT2P31751 481 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 HSD17B2P37059 387 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 ENPP2Q13822 863 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 PDZD9Q8IXQ8 264 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 PRR22Q8IZ63 422 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 OR2T33Q8NG76 320 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 SETD7Q8WTS6 366 aaKnown RBP14.29□□□□□ -0.12
VARS2-201ENST00000321897 THEM6Q8WUY1 208 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 GLIPR2Q9H4G4 154 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 SPHK1Q9NYA1 384 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 MEIS3P1A6NDR6 274 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 ELOA3DA6NLF2 546 aaPredicted RBP14.28□□□□□ -0.12
VARS2-201ENST00000321897 EIF1AYO14602 144 aaKnown RBP14.28□□□□□ -0.12
VARS2-201ENST00000321897 ARAFP10398 606 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 HOXB3P14651 431 aaPredicted RBP14.28□□□□□ -0.12
VARS2-201ENST00000321897 PVALBP20472 110 aaPredicted RBP14.28□□□□□ -0.12
VARS2-201ENST00000321897 HIST1H1TP22492 207 aaPredicted RBP14.28□□□□□ -0.12
VARS2-201ENST00000321897 PITPNBP48739 271 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 ELOA3BQ3SY89 546 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 PRAMEF17Q5VTA0 474 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 GALNTL5Q7Z4T8 443 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 LRRC25Q8N386 305 aaPredicted RBP14.28□□□□□ -0.12
VARS2-201ENST00000321897 ACBD7Q8N6N7 88 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 SLC16A11Q8NCK7 471 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 NAXEQ8NCW5 288 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 ELOA3Q8NG57 546 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.28□□□□□ -0.12
VARS2-201ENST00000321897 NIPAL2Q9H841 368 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 PRSS16Q9NQE7 514 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 OR2S2Q9NQN1 319 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 CENPMQ9NSP4 180 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 CNOT2Q9NZN8 540 aaKnown RBP14.28□□□□□ -0.12
VARS2-201ENST00000321897 MYEF2Q9P2K5 600 aaKnown RBP14.28□□□□□ -0.12
VARS2-201ENST00000321897 KANTRA0A1W2PQU2 76 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 C1orf226A1L170 272 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 ZC3H12DA2A288 527 aaKnown RBP14.28□□□□□ -0.12
VARS2-201ENST00000321897 CDC14CA4D256 554 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 C5orf51A6NDU8 294 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 PDCD5O14737 125 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 RDH16O75452 317 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 PLGP00747 810 aaPredicted RBP14.28□□□□□ -0.12
VARS2-201ENST00000321897 HMGN1P05114 100 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 GSTM3P21266 225 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 GRK6P43250 576 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 SKP1P63208 163 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 KCNJ10P78508 379 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 OTPQ5XKR4 325 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 REM2Q8IYK8 340 aaPredicted RBP14.28□□□□□ -0.12
VARS2-201ENST00000321897 ZNF615Q8N8J6 731 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 SUN3Q8TAQ9 357 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 CHTF18Q8WVB6 975 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 SRRQ9GZT4 340 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 MYNNQ9NPC7 610 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 FARSAQ9Y285 508 aaKnown RBP14.28□□□□□ -0.12
VARS2-201ENST00000321897 NOP16Q9Y3C1 178 aaKnown RBP14.28□□□□□ -0.12
VARS2-201ENST00000321897 SLC5A10A0PJK1 596 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 AIFM1O95831 613 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 F8A1P23610 371 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 SQSTM1Q13501 440 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 ZNF676Q8N7Q3 588 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 OR52E2Q8NGJ4 325 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 OR56A3Q8NH54 315 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 DDOQ99489 341 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 AIFM2Q9BRQ8 373 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 MCCC2Q9HCC0 563 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 ZNF226Q9NYT6 803 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 ZNF831Q5JPB2 1677 aa14.28□□□□□ -0.12
VARS2-201ENST00000321897 A0A0A6YYC8 382 aaPredicted RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms