RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 OR2L13Q8N349 312 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 C7orf57Q8NEG2 295 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 ZNF649Q9BS31 505 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 RBCK1Q9BYM8 510 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 MTIF3Q9H2K0 278 aaKnown RBP16.18■□□□□ 0.18
COL9A1-201ENST00000320755 PAQR5Q9NXK6 330 aaPredicted RBP16.18■□□□□ 0.18
COL9A1-201ENST00000320755 NLKQ9UBE8 527 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 PHF11Q9UIL8 331 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 DAPL1A0PJW8 107 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 CHST10O43529 356 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 COQ9O75208 318 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 PPP3R1P63098 170 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 GPR18Q14330 331 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 TMEM91Q6ZNR0 172 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 VWA5B2Q8N398 1253 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 ACBD7Q8N6N7 88 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 ARIH2OSQ8N7S6 290 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 TMEM239Q8WW34 195 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 NR4A3Q92570 626 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 PRSS27Q9BQR3 290 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 ALG8Q9BVK2 526 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 ANKRD19PQ9H560 264 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 RNF121Q9H920 327 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 KLF15Q9UIH9 416 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 FBXL4Q9UKA2 621 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 CACNA1IQ9P0X4 2223 aa16.18■□□□□ 0.18
COL9A1-201ENST00000320755 A0A0B4J293 547 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 GXYLT2A0PJZ3 443 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 TRAPPC13A5PLN9 417 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 KLF4O43474 513 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 FXYD6P3P58550 94 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 ZNF57Q68EA5 555 aaPredicted RBP16.17■□□□□ 0.18
COL9A1-201ENST00000320755 ANKRD54Q6NXT1 300 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 CHAC2Q8WUX2 184 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 RNF31Q96EP0 1072 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 SERINC2Q96SA4 455 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 WACQ9BTA9 647 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 PBX4Q9BYU1 374 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 RNF32Q9H0A6 362 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 NPAP1Q9NZP6 1156 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.17■□□□□ 0.18
COL9A1-201ENST00000320755 H0YGG7 62 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 KCNJ13O60928 360 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 STX11O75558 287 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 CHRNB1P11230 501 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 TBXA2RP21731 343 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 ARF3P61204 181 aaPredicted RBP16.17■□□□□ 0.18
COL9A1-201ENST00000320755 EEF1A1P68104 462 aaKnown RBP16.17■□□□□ 0.18
COL9A1-201ENST00000320755 SLC3A1Q07837 685 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 PPP2R2DQ66LE6 453 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 FCRL6Q6DN72 434 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 VASNQ6EMK4 673 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 CD200R1LQ6Q8B3 271 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 ZAR1Q86SH2 424 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 GHDCQ8N2G8 530 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 GFM1Q96RP9 751 aaKnown RBP16.17■□□□□ 0.18
COL9A1-201ENST00000320755 ISYNA1Q9NPH2 558 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 CLEC4AQ9UMR7 237 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 YBX2Q9Y2T7 364 aaKnown RBP16.17■□□□□ 0.18
COL9A1-201ENST00000320755 FAM240BA0A1B0GVZ2 78 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 HMX3A6NHT5 357 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 E9PI62 339 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 NOS3P29474 1203 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 EOGTQ5NDL2 527 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 FAM181AQ8N9Y4 354 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 FAM3CQ92520 227 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 RIPOR3Q96MK2 946 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 HS6ST2Q96MM7 605 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 SDK1Q7Z5N4 2213 aa16.17■□□□□ 0.18
COL9A1-201ENST00000320755 SHC1P29353 583 aa16.16■□□□□ 0.18
COL9A1-201ENST00000320755 MAP2K3P46734 347 aa16.16■□□□□ 0.18
COL9A1-201ENST00000320755 RPTNQ6XPR3 784 aa16.16■□□□□ 0.18
COL9A1-201ENST00000320755 SLC7A6Q92536 515 aa16.16■□□□□ 0.18
COL9A1-201ENST00000320755 RERGQ96A58 199 aaPredicted RBP16.16■□□□□ 0.18
COL9A1-201ENST00000320755 SLC22A18Q96BI1 424 aa16.16■□□□□ 0.18
COL9A1-201ENST00000320755 WDR92Q96MX6 357 aa16.16■□□□□ 0.18
COL9A1-201ENST00000320755 PTCHD1Q96NR3 888 aa16.16■□□□□ 0.18
COL9A1-201ENST00000320755 NECTIN4Q96NY8 510 aa16.16■□□□□ 0.18
COL9A1-201ENST00000320755 OR2B2Q9GZK3 357 aa16.16■□□□□ 0.18
COL9A1-201ENST00000320755 PPIL3Q9H2H8 161 aaKnown RBP16.16■□□□□ 0.18
COL9A1-201ENST00000320755 KRCC1Q9NPI7 259 aaPredicted RBP16.16■□□□□ 0.18
COL9A1-201ENST00000320755 ACTR10Q9NZ32 417 aa16.16■□□□□ 0.18
COL9A1-201ENST00000320755 EXOGQ9Y2C4 368 aaKnown RBP16.16■□□□□ 0.18
COL9A1-201ENST00000320755 SLC22A7Q9Y694 548 aa16.16■□□□□ 0.18
COL9A1-201ENST00000320755 SPEGQ15772 3267 aa16.16■□□□□ 0.18
COL9A1-201ENST00000320755 A0A1W2PPK0 400 aa16.16■□□□□ 0.18
COL9A1-201ENST00000320755 A0A1W2PQF6 199 aa16.16■□□□□ 0.18
COL9A1-201ENST00000320755 GTPBP1O00178 669 aaKnown RBP16.16■□□□□ 0.18
COL9A1-201ENST00000320755 MAGEB4O15481 346 aaPredicted RBP16.16■□□□□ 0.18
COL9A1-201ENST00000320755 CT62P0C5K7 136 aa16.16■□□□□ 0.18
COL9A1-201ENST00000320755 ACVR1BP36896 505 aa16.16■□□□□ 0.18
COL9A1-201ENST00000320755 EVX1P49640 407 aa16.16■□□□□ 0.18
COL9A1-201ENST00000320755 DUSP8Q13202 625 aa16.16■□□□□ 0.18
COL9A1-201ENST00000320755 FZD5Q13467 585 aa16.16■□□□□ 0.18
COL9A1-201ENST00000320755 SYCE2Q6PIF2 218 aa16.16■□□□□ 0.18
COL9A1-201ENST00000320755 ASB18Q6ZVZ8 466 aa16.16■□□□□ 0.18
COL9A1-201ENST00000320755 NR2C2APQ86WQ0 139 aa16.16■□□□□ 0.18
COL9A1-201ENST00000320755 ZNF619Q8N2I2 560 aa16.16■□□□□ 0.18
COL9A1-201ENST00000320755 BPIFA2Q96DR5 249 aa16.16■□□□□ 0.18
COL9A1-201ENST00000320755 BMFQ96LC9 184 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms