RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 SLC43A2Q8N370 569 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 COLGALT1Q8NBJ5 622 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 CCDC110Q8TBZ0 833 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 C2orf15Q8WU43 125 aaKnown RBP3.5□□□□□ -1.85
SMCO3-201ENST00000316048 SMAP2Q8WU79 429 aaPredicted RBP3.5□□□□□ -1.85
SMCO3-201ENST00000316048 GLYATL1Q969I3 302 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 GUCD1Q96NT3 240 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 OLFM3Q96PB7 478 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 VAT1Q99536 393 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 PKMYT1Q99640 499 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 TMEM175Q9BSA9 504 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 NAT9Q9BTE0 207 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 NSRP1Q9H0G5 558 aaKnown RBP3.5□□□□□ -1.85
SMCO3-201ENST00000316048 C3orf14Q9HBI5 128 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 DDX28Q9NUL7 540 aaKnown RBP3.5□□□□□ -1.85
SMCO3-201ENST00000316048 INTS10Q9NVR2 710 aaKnown RBP3.5□□□□□ -1.85
SMCO3-201ENST00000316048 PSMC3IPQ9P2W1 217 aaPredicted RBP3.5□□□□□ -1.85
SMCO3-201ENST00000316048 GGA2Q9UJY4 613 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 ADAM28Q9UKQ2 775 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 BLOC1S6Q9UL45 172 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 AURKCQ9UQB9 309 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 PRG3Q9Y2Y8 225 aaPredicted RBP3.5□□□□□ -1.85
SMCO3-201ENST00000316048 ATG4BQ9Y4P1 393 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 THSD7BQ9C0I4 1608 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 TDRD15B5MCY1 1934 aaKnown RBP3.5□□□□□ -1.85
SMCO3-201ENST00000316048 ATP6AP2A0A1C7CYW4 349 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 FAM47DPA6NHR8 397 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 MSGN1A6NI15 193 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 ERI2A8K979 691 aaKnown RBP3.5□□□□□ -1.85
SMCO3-201ENST00000316048 FGF17O60258 216 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 LMX1BO60663 402 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 KIAA0754O94854 1291 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 EPOP01588 193 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 ACKR3P25106 362 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 SLC1A3P43003 542 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 GPX6P59796 221 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 RPL10AP62906 217 aaKnown RBP3.5□□□□□ -1.85
SMCO3-201ENST00000316048 IL9RQ01113 521 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 ZNF33AQ06730 810 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 PPIDQ08752 370 aaKnown RBP3.5□□□□□ -1.85
SMCO3-201ENST00000316048 HNRNPDQ14103 355 aaKnown RBP3.5□□□□□ -1.85
SMCO3-201ENST00000316048 DPYSQ14117 519 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 PRPSAP1Q14558 356 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 FASTKD3Q14CZ7 662 aaKnown RBP3.5□□□□□ -1.85
SMCO3-201ENST00000316048 WSCD2Q2TBF2 565 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 CMPK2Q5EBM0 449 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 FFAR4Q5NUL3 377 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 FAM53AQ6NSI3 398 aaPredicted RBP3.5□□□□□ -1.85
SMCO3-201ENST00000316048 LRRC8BQ6P9F7 803 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 CYS1Q717R9 158 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 LRRC6Q86X45 466 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 LRRC49Q8IUZ0 686 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 TEX9Q8N6V9 391 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 OR10V1Q8NGI7 309 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 OR4L1Q8NH43 312 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 SPPL2BQ8TCT7 592 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 DQX1Q8TE96 717 aaKnown RBP3.5□□□□□ -1.85
SMCO3-201ENST00000316048 SERPINB11Q96P15 392 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 CASD1Q96PB1 797 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 DEFB118Q96PH6 123 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 PPP1R2P1Q96PQ5 205 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 LGMNQ99538 433 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 NUSAP1Q9BXS6 441 aaKnown RBP3.5□□□□□ -1.85
SMCO3-201ENST00000316048 MMP28Q9H239 520 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 CXXC4Q9H2H0 198 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 TRABDQ9H4I3 376 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 ZNF334Q9HCZ1 680 aaPredicted RBP3.5□□□□□ -1.85
SMCO3-201ENST00000316048 KLHL8Q9P2G9 620 aaPredicted RBP3.5□□□□□ -1.85
SMCO3-201ENST00000316048 CHMP2BQ9UQN3 213 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 SCML2Q9UQR0 700 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 PLEKHA6Q9Y2H5 1048 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 RRP15Q9Y3B9 282 aaKnown RBP3.5□□□□□ -1.85
SMCO3-201ENST00000316048 MAD1L1Q9Y6D9 718 aa3.5□□□□□ -1.85
SMCO3-201ENST00000316048 CLUHO75153 1309 aa3.49□□□□□ -1.85
SMCO3-201ENST00000316048 IGKV2D-30A0A075B6S6 120 aa3.49□□□□□ -1.85
SMCO3-201ENST00000316048 GOLGA6L7A0A1B0GV03 622 aa3.49□□□□□ -1.85
SMCO3-201ENST00000316048 TCRBV9S1A1TA0A576 114 aa3.49□□□□□ -1.85
SMCO3-201ENST00000316048 FAM72CH0Y354 149 aa3.49□□□□□ -1.85
SMCO3-201ENST00000316048 MFSD11O43934 449 aa3.49□□□□□ -1.85
SMCO3-201ENST00000316048 BANF1O75531 89 aa3.49□□□□□ -1.85
SMCO3-201ENST00000316048 IGLV3-25P01717 112 aa3.49□□□□□ -1.85
SMCO3-201ENST00000316048 APOEP02649 317 aa3.49□□□□□ -1.85
SMCO3-201ENST00000316048 OR4Q2P0C623 313 aa3.49□□□□□ -1.85
SMCO3-201ENST00000316048 CCL5P13501 91 aa3.49□□□□□ -1.85
SMCO3-201ENST00000316048 CCNCP24863 283 aa3.49□□□□□ -1.85
SMCO3-201ENST00000316048 LEPRP48357 1165 aaKnown RBP3.49□□□□□ -1.85
SMCO3-201ENST00000316048 TUFMP49411 452 aaKnown RBP3.49□□□□□ -1.85
SMCO3-201ENST00000316048 CCL11P51671 97 aa3.49□□□□□ -1.85
SMCO3-201ENST00000316048 ARPP19P56211 112 aa3.49□□□□□ -1.85
SMCO3-201ENST00000316048 SRSF9Q13242 221 aaKnown RBP eCLIP3.49□□□□□ -1.85
SMCO3-201ENST00000316048 HEPACAMQ14CZ8 416 aa3.49□□□□□ -1.85
SMCO3-201ENST00000316048 TEX44Q53QW1 395 aa3.49□□□□□ -1.85
SMCO3-201ENST00000316048 STPG1Q5TH74 334 aa3.49□□□□□ -1.85
SMCO3-201ENST00000316048 FAM72AQ5TYM5 149 aa3.49□□□□□ -1.85
SMCO3-201ENST00000316048 HHATQ5VTY9 493 aa3.49□□□□□ -1.85
SMCO3-201ENST00000316048 FAM72DQ6L9T8 149 aa3.49□□□□□ -1.85
SMCO3-201ENST00000316048 RWDD4Q6NW29 188 aaKnown RBP3.49□□□□□ -1.85
SMCO3-201ENST00000316048 CD164L2Q6UWJ8 174 aa3.49□□□□□ -1.85
SMCO3-201ENST00000316048 TMEM26Q6ZUK4 368 aa3.49□□□□□ -1.85
SMCO3-201ENST00000316048 BHLHA9Q7RTU4 235 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms