RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 ZNF551Q7Z340 670 aaPredicted RBP4.56□□□□□ -1.68
CKS1B-201ENST00000308987 TAF8Q7Z7C8 310 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 GALNT5Q7Z7M9 940 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 CCDC190Q86UF4 302 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 GKN2Q86XP6 184 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 RNF130Q86XS8 419 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 KRT73Q86Y46 540 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 CCDC71Q8IV32 467 aaPredicted RBP4.56□□□□□ -1.68
CKS1B-201ENST00000308987 RAVER1Q8IY67 606 aaKnown RBP4.56□□□□□ -1.68
CKS1B-201ENST00000308987 NAGSQ8N159 534 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 C10orf111Q8N326 155 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 NATD1Q8N6N6 113 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 OR4C15Q8NGM1 316 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 PSMA8Q8TAA3 256 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 LKAAEAR1Q8TD35 194 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 APH1BQ8WW43 257 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 PROX1Q92786 737 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 GGHQ92820 318 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 GCDHQ92947 438 aaPredicted RBP4.56□□□□□ -1.68
CKS1B-201ENST00000308987 MIB2Q96AX9 1013 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 TMCO6Q96DC7 493 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 ECHDC3Q96DC8 303 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 MTERF3Q96E29 417 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 SCRN2Q96FV2 425 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 TSSK3Q96PN8 268 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 PANX1Q96RD7 426 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 SNX18Q96RF0 628 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 HBEGFQ99075 208 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 INPP5KQ9BT40 448 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 DUSP26Q9BV47 211 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 REXO4Q9GZR2 422 aaKnown RBP4.56□□□□□ -1.68
CKS1B-201ENST00000308987 TMEM38AQ9H6F2 299 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 TPT1P8Q9HAU6 139 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 C3orf14Q9HBI5 128 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 ATP6V1HQ9UI12 483 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 ZNF229Q9UJW7 825 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 PILRAQ9UKJ1 303 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 CBLCQ9ULV8 474 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 VPS4AQ9UN37 437 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 WBP11Q9Y2W2 641 aaKnown RBP4.56□□□□□ -1.68
CKS1B-201ENST00000308987 LYVE1Q9Y5Y7 322 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 PRSS21Q9Y6M0 314 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 U3KQV3 271 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 VPS13CQ709C8 3753 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 DNHD1Q96M86 4753 aa4.56□□□□□ -1.68
CKS1B-201ENST00000308987 NIPBLQ6KC79 2804 aaeCLIP4.55□□□□□ -1.68
CKS1B-201ENST00000308987 IGHV1OR21-1A0A087WYE8 117 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 PRSS38A1L453 326 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 FAM172BPA6NC97 362 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 A8MX80 341 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 CENPBD1B2RD01 187 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 STMND1H3BQB6 276 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 TNFRSF11BO00300 401 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 FOXE1O00358 373 aaPredicted RBP4.55□□□□□ -1.68
CKS1B-201ENST00000308987 NUDT21O43809 227 aaKnown RBP4.55□□□□□ -1.68
CKS1B-201ENST00000308987 UGT2B17O75795 530 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 CLDN7O95471 211 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 LGI1O95970 557 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 SOD1P00441 154 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 AMY2AP04746 511 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 LCKP06239 509 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 HOXC4P09017 264 aaPredicted RBP4.55□□□□□ -1.68
CKS1B-201ENST00000308987 SFTPCP11686 197 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 COX7A2P14406 83 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 ZNF30P17039 623 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 DDX5P17844 614 aaKnown RBP4.55□□□□□ -1.68
CKS1B-201ENST00000308987 AMY2BP19961 511 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 NR4A1P22736 598 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 CHMP24386 653 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 GADD45AP24522 165 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 CD82P27701 267 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 ALDH4A1P30038 563 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 CCR7P32248 378 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 CDKN2CP42773 168 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 SLC15A1P46059 708 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 RPS5P46782 204 aaKnown RBP4.55□□□□□ -1.68
CKS1B-201ENST00000308987 UQCRFS1P47985 274 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 MAN2A2P49641 1150 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 RGS6P49758 472 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 TPTEP56180 551 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 DCDC1P59894 354 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 CDC42P60953 191 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 SNRPGP62308 76 aaKnown RBP4.55□□□□□ -1.68
CKS1B-201ENST00000308987 RHAGQ02094 409 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 IRF8Q02556 426 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 PPP1R8Q12972 351 aaKnown RBP4.55□□□□□ -1.68
CKS1B-201ENST00000308987 CHIT1Q13231 466 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 DNASE1L3Q13609 305 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 RGNQ15493 299 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 ZNF630Q2M218 657 aaPredicted RBP4.55□□□□□ -1.68
CKS1B-201ENST00000308987 PTCHD3Q3KNS1 767 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 SPANXN2Q5MJ10 180 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 CATSPEREQ5SY80 951 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 C1QTNF12Q5T7M4 302 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 CPTPQ5TA50 214 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 AGAP6Q5VW22 663 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 LRRC66Q68CR7 880 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 ZNF544Q6NX49 715 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 Q6ZRM9 215 aa4.55□□□□□ -1.68
CKS1B-201ENST00000308987 ZNF621Q6ZSS3 439 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms