RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 FUT5Q11128 374 aa17.8■□□□□ 0.44
PDZRN3-202ENST00000308537 PON3Q15166 354 aa17.8■□□□□ 0.44
PDZRN3-202ENST00000308537 SPDYE7PQ495Y7 208 aa17.8■□□□□ 0.44
PDZRN3-202ENST00000308537 HHATQ5VTY9 493 aa17.8■□□□□ 0.44
PDZRN3-202ENST00000308537 HEPHL1Q6MZM0 1159 aa17.8■□□□□ 0.44
PDZRN3-202ENST00000308537 ZNF474Q6S9Z5 364 aaPredicted RBP17.8■□□□□ 0.44
PDZRN3-202ENST00000308537 MAVSQ7Z434 540 aa17.8■□□□□ 0.44
PDZRN3-202ENST00000308537 MTERF4Q7Z6M4 381 aaKnown RBP17.8■□□□□ 0.44
PDZRN3-202ENST00000308537 KIRREL3Q8IZU9 778 aa17.8■□□□□ 0.44
PDZRN3-202ENST00000308537 B4GALNT2Q8NHY0 566 aa17.8■□□□□ 0.44
PDZRN3-202ENST00000308537 ZBTB8AQ96BR9 441 aa17.8■□□□□ 0.44
PDZRN3-202ENST00000308537 DPY30Q9C005 99 aa17.8■□□□□ 0.44
PDZRN3-202ENST00000308537 AIG1Q9NVV5 245 aa17.8■□□□□ 0.44
PDZRN3-202ENST00000308537 A0A0J9YW62 118 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 RNF103-CHMP3A0A140T963 221 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 PRSS51A0A1B0GVH4 220 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 A0A1W2PPR1 153 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 PRAMEF27A3QJZ7 478 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 TUBAL3A6NHL2 446 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 ZNF195O14628 629 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 MSTNO14793 375 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 CFLARO15519 480 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 FCMRO60667 390 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 DNAJA2O60884 412 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 SOX30O94993 753 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 NTN1O95631 604 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 KRT16P08779 473 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 EPXP11678 715 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 CCKARP32238 428 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 SOAT1P35610 550 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 EEFSECP57772 596 aaKnown RBP17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 UFM1P61960 85 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 RAC1P63000 192 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 TOMM34Q15785 309 aaPredicted RBP17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 NDUFAF6Q330K2 333 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 SAXO2Q658L1 398 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 OR2A2Q6IF42 318 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 KIF18BQ86Y91 864 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 WDR75Q8IWA0 830 aaKnown RBP17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 SMPDL3BQ92485 455 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 LRRC46Q96FV0 321 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 MAELQ96JY0 434 aaKnown RBP17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 PAIP2Q9BPZ3 127 aaKnown RBP17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 ZNF350Q9GZX5 532 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 WDR55Q9H6Y2 383 aaPredicted RBP17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 HHATLQ9HCP6 504 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 THAP1Q9NVV9 213 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 DNAJB12Q9NXW2 375 aaKnown RBP17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 ITGB1BP2Q9UKP3 347 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 GPR45Q9Y5Y3 372 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 ROS1P08922 2347 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 ACANP16112 2415 aa17.79■□□□□ 0.44
PDZRN3-202ENST00000308537 C9JVG2 144 aa17.78■□□□□ 0.44
PDZRN3-202ENST00000308537 ETV2O00321 342 aaPredicted RBP17.78■□□□□ 0.44
PDZRN3-202ENST00000308537 MATN1P21941 496 aa17.78■□□□□ 0.44
PDZRN3-202ENST00000308537 EPHA3P29320 983 aa17.78■□□□□ 0.44
PDZRN3-202ENST00000308537 EEF1A1P68104 462 aaKnown RBP17.78■□□□□ 0.44
PDZRN3-202ENST00000308537 PLAURQ03405 335 aa17.78■□□□□ 0.44
PDZRN3-202ENST00000308537 FOXF1Q12946 379 aa17.78■□□□□ 0.44
PDZRN3-202ENST00000308537 EEF1A1P5Q5VTE0 462 aa17.78■□□□□ 0.44
PDZRN3-202ENST00000308537 SPNS3Q6ZMD2 512 aa17.78■□□□□ 0.44
PDZRN3-202ENST00000308537 OR10D3Q8NH80 312 aa17.78■□□□□ 0.44
PDZRN3-202ENST00000308537 PHOSPHO1Q8TCT1 267 aa17.78■□□□□ 0.44
PDZRN3-202ENST00000308537 MGARPQ8TDB4 240 aa17.78■□□□□ 0.44
PDZRN3-202ENST00000308537 GPR119Q8TDV5 335 aa17.78■□□□□ 0.44
PDZRN3-202ENST00000308537 CHMP6Q96FZ7 201 aa17.78■□□□□ 0.44
PDZRN3-202ENST00000308537 NMUR2Q9GZQ4 415 aa17.78■□□□□ 0.44
PDZRN3-202ENST00000308537 HOXD1Q9GZZ0 328 aa17.78■□□□□ 0.44
PDZRN3-202ENST00000308537 CLEC4MQ9H2X3 399 aaPredicted RBP17.78■□□□□ 0.44
PDZRN3-202ENST00000308537 CARD8Q9Y2G2 431 aa17.78■□□□□ 0.44
PDZRN3-202ENST00000308537 DTNAQ9Y4J8 743 aa17.78■□□□□ 0.44
PDZRN3-202ENST00000308537 E9PBE3 544 aa17.77■□□□□ 0.44
PDZRN3-202ENST00000308537 EIF1AYO14602 144 aaKnown RBP17.77■□□□□ 0.44
PDZRN3-202ENST00000308537 HDAC3O15379 428 aa17.77■□□□□ 0.44
PDZRN3-202ENST00000308537 UGT2B17O75795 530 aa17.77■□□□□ 0.44
PDZRN3-202ENST00000308537 OPN1LWP04000 364 aa17.77■□□□□ 0.44
PDZRN3-202ENST00000308537 HPGDP15428 266 aa17.77■□□□□ 0.44
PDZRN3-202ENST00000308537 ATP6V1C1P21283 382 aa17.77■□□□□ 0.44
PDZRN3-202ENST00000308537 P2RX1P51575 399 aa17.77■□□□□ 0.44
PDZRN3-202ENST00000308537 CASP9P55211 416 aa17.77■□□□□ 0.44
PDZRN3-202ENST00000308537 FAM27E3Q08E93 113 aa17.77■□□□□ 0.44
PDZRN3-202ENST00000308537 ZNF141Q15928 474 aa17.77■□□□□ 0.44
PDZRN3-202ENST00000308537 DPY19L1Q2PZI1 675 aa17.77■□□□□ 0.44
PDZRN3-202ENST00000308537 ARHGAP11BQ3KRB8 267 aa17.77■□□□□ 0.44
PDZRN3-202ENST00000308537 FAM174BQ3ZCQ3 159 aa17.77■□□□□ 0.44
PDZRN3-202ENST00000308537 BHLHB9Q6PI77 547 aa17.77■□□□□ 0.44
PDZRN3-202ENST00000308537 P4HA3Q7Z4N8 544 aa17.77■□□□□ 0.44
PDZRN3-202ENST00000308537 CDC20BQ86Y33 519 aa17.77■□□□□ 0.44
PDZRN3-202ENST00000308537 OR4A15Q8NGL6 344 aa17.77■□□□□ 0.44
PDZRN3-202ENST00000308537 RAB3IL1Q8TBN0 382 aa17.77■□□□□ 0.44
PDZRN3-202ENST00000308537 ARSGQ96EG1 525 aa17.77■□□□□ 0.44
PDZRN3-202ENST00000308537 SLC35G5Q96KT7 338 aa17.77■□□□□ 0.44
PDZRN3-202ENST00000308537 CCDC115Q96NT0 180 aa17.77■□□□□ 0.44
PDZRN3-202ENST00000308537 POLDIP3Q9BY77 421 aaKnown RBP17.77■□□□□ 0.44
PDZRN3-202ENST00000308537 OPN3Q9H1Y3 402 aaPredicted RBP17.77■□□□□ 0.44
PDZRN3-202ENST00000308537 OR51I1Q9H343 314 aa17.77■□□□□ 0.44
PDZRN3-202ENST00000308537 TMEM185BQ9H7F4 350 aa17.77■□□□□ 0.44
PDZRN3-202ENST00000308537 MARCOQ9UEW3 520 aaPredicted RBP17.77■□□□□ 0.44
PDZRN3-202ENST00000308537 GOLGA8QA0A0J9YX86 632 aa17.76■□□□□ 0.43
PDZRN3-202ENST00000308537 GOLGA8OA6NCC3 632 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms