RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 HELZP42694 1942 aaKnown RBP13.6□□□□□ -0.23
PTPN9-201ENST00000306726 M0R233 179 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 UBXN7O94888 489 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 CEBPBP17676 345 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 CSNK2A2P19784 350 aaPredicted RBP13.6□□□□□ -0.23
PTPN9-201ENST00000306726 PGDP52209 483 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 ST3GAL3Q11203 375 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 SMAD2Q15796 467 aaKnown RBP13.6□□□□□ -0.23
PTPN9-201ENST00000306726 DEFB110Q30KQ9 67 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 FAM111BQ6SJ93 734 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 DNAAF1Q8NEP3 725 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 SENP5Q96HI0 755 aaPredicted RBP13.6□□□□□ -0.23
PTPN9-201ENST00000306726 MARK1Q9P0L2 795 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 PRAMEF27A3QJZ7 478 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 ARPC1BO15143 372 aaKnown RBP13.6□□□□□ -0.23
PTPN9-201ENST00000306726 PVRP15151 417 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 AK4P27144 223 aaPredicted RBP13.6□□□□□ -0.23
PTPN9-201ENST00000306726 TRAM2Q15035 370 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 RAB42Q8N4Z0 105 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 OR2T33Q8NG76 320 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 OR52E2Q8NGJ4 325 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 FANK1Q8TC84 345 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 PDXPQ96GD0 296 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 ABHD1Q96SE0 405 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 ZMAT3Q9HA38 289 aaKnown RBP13.6□□□□□ -0.23
PTPN9-201ENST00000306726 KCMF1Q9P0J7 381 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 CLEC1BQ9P126 229 aa13.6□□□□□ -0.23
PTPN9-201ENST00000306726 SIRT4Q9Y6E7 314 aaPredicted RBP13.6□□□□□ -0.23
PTPN9-201ENST00000306726 IDSB3KWA1 339 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 NUDT14O95848 222 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 ACP2P11117 423 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 FOSL2P15408 326 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 VEGFCP49767 419 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 KHKP50053 298 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 DUSP2Q05923 314 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 SGCGQ13326 291 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 ZNF77Q15935 545 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 METTL3Q86U44 580 aaKnown RBP13.59□□□□□ -0.23
PTPN9-201ENST00000306726 SMRP1Q8NCR6 262 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 TMEM163Q8TC26 289 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 COQ10AQ96MF6 247 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 MNTQ99583 582 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 SPATA5L1Q9BVQ7 753 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 NEUROD4Q9HD90 331 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 MYNNQ9NPC7 610 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 DEC1Q9P2X7 70 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 MGAT4CQ9UBM8 478 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 HEATR5BQ9P2D3 2071 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 SPDEFO95238 335 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 NFATC1O95644 943 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 MAS1P04201 325 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 ANXA3P12429 323 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 MRPL19P49406 292 aaKnown RBP13.59□□□□□ -0.23
PTPN9-201ENST00000306726 TAS2R38P59533 333 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 LGALS3BPQ08380 585 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 ACSM3Q53FZ2 586 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 OR4Q3Q8NH05 313 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 OR5W2Q8NH69 310 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 ERMAPQ96PL5 475 aaPredicted RBP13.59□□□□□ -0.23
PTPN9-201ENST00000306726 RSPO3Q9BXY4 272 aaPredicted RBP13.59□□□□□ -0.23
PTPN9-201ENST00000306726 POT1Q9NUX5 634 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 GLTPQ9NZD2 209 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 CACNG2Q9Y698 323 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 ANAPC1Q9H1A4 1944 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 A0A1W2PP55 124 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 SLC5A10A0PJK1 596 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 AGAP14A8MT82 685 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 CPMP14384 443 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 HOXB6P17509 224 aaKnown RBP13.59□□□□□ -0.23
PTPN9-201ENST00000306726 HK1P19367 917 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 AGFG1P52594 562 aaKnown RBP13.59□□□□□ -0.23
PTPN9-201ENST00000306726 AKR1C2P52895 323 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 PRR5P85299 388 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 AKR1C1Q04828 323 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 SNTA1Q13424 505 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 ASAH1Q13510 395 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 YIF1BQ5BJH7 314 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 DMRTC1Q5HYR2 192 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 MEDAGQ5VYS4 303 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 ZDHHC20Q5W0Z9 365 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 OR4C11Q6IEV9 310 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 C12orf40Q86WS4 652 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 YAF2Q8IY57 180 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 COX18Q8N8Q8 333 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 ACOT4Q8N9L9 421 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 C17orf47Q8NEP4 570 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 SETD6Q8TBK2 473 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 OR8D1Q8WZ84 308 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 SLC41A3Q96GZ6 507 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 MS4A3Q96HJ5 214 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 SRA1Q9HD15 236 aaKnown RBP13.59□□□□□ -0.23
PTPN9-201ENST00000306726 FKBP14Q9NWM8 211 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 FBXO34Q9NWN3 711 aa13.59□□□□□ -0.23
PTPN9-201ENST00000306726 CENPVL1A0A0U1RR11 272 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 FAM86C2PA6NEL3 165 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 CDC42EP2O14613 210 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 H2AFB2P0C5Z0 115 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 PRLHRP49683 370 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 NDUFAF6Q330K2 333 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 HENMT1Q5T8I9 393 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms