RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 ITPRIPL2Q3MIP1 535 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 PRICKLE2Q7Z3G6 844 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 ZER1Q7Z7L7 766 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 OR5K2Q8NHB8 316 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 THAP6Q8TBB0 222 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 TSACCQ96A04 125 aaPredicted RBP12.44□□□□□ -0.42
DDX54-201ENST00000306014 ATG5Q9H1Y0 275 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 MKL2Q9ULH7 1088 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 COL11A1P12107 1806 aaPredicted RBP12.44□□□□□ -0.42
DDX54-201ENST00000306014 C17orf113A0A1B0GUU1 675 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 EIF1AYO14602 144 aaKnown RBP12.44□□□□□ -0.42
DDX54-201ENST00000306014 RNGTTO60942 597 aaKnown RBP12.44□□□□□ -0.42
DDX54-201ENST00000306014 SPARCP09486 303 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 SNRPBP14678 240 aaKnown RBP12.44□□□□□ -0.42
DDX54-201ENST00000306014 RAB12Q6IQ22 244 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 LYPD4Q6UWN0 246 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 LRRN1Q6UXK5 716 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 NLRP8Q86W28 1048 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 ZNF101Q8IZC7 436 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 TAPBPLQ9BX59 468 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 NDUFB11Q9NX14 153 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 TRIP12Q14669 1992 aaPredicted RBP12.44□□□□□ -0.42
DDX54-201ENST00000306014 A0A0X1KG70 313 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 FBXO45P0C2W1 286 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 CD22P20273 847 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 CTGFP29279 349 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 SLC6A11P48066 632 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 GPR143P51810 404 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 LTB4RQ15722 352 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 SLC25A24Q6NUK1 477 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 SPERTQ8NA61 448 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 OR13C2Q8NGS9 318 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 OR5J2Q8NH18 312 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 SAMD11Q96NU1 681 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 ZNF559Q9BR84 538 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 TM7SF3Q9NS93 570 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 TAS2R3Q9NYW6 316 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 COPS7AQ9UBW8 275 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 SCP2D1Q9UJQ7 156 aa12.44□□□□□ -0.42
DDX54-201ENST00000306014 TRDV1A0A1B0GX56 115 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 MEN1O00255 615 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 NDUFB2O95178 105 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 PRPH2P23942 346 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 RBM34P42696 430 aaKnown RBP12.43□□□□□ -0.42
DDX54-201ENST00000306014 PTH2RP49190 550 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 TRA2BP62995 288 aaKnown RBP12.43□□□□□ -0.42
DDX54-201ENST00000306014 SCRN3Q0VDG4 424 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 ASAH1Q13510 395 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 ARFRP1Q13795 201 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 EFR3AQ14156 821 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 GBX1Q14549 363 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 LEG1Q6P5S2 330 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 FAM198BQ6UWH4 519 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 CSNK1A1LQ8N752 337 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 SLC17A9Q9BYT1 436 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 B4DXG7 233 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 HMGN4O00479 90 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 PPM1BO75688 479 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 CLDN2P57739 230 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 CCDC58Q4VC31 144 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 TCEAL5Q5H9L2 206 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 SAXO2Q658L1 398 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 LHX8Q68G74 356 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 HBMQ6B0K9 141 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 FOXRED2Q8IWF2 684 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 FAM26EQ8N5C1 309 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 CDRT4Q8N9R6 151 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 MSLNLQ96KJ4 702 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 TMEM185BQ9H7F4 350 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 HHATLQ9HCP6 504 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 ZNF443Q9Y2A4 671 aaPredicted RBP12.43□□□□□ -0.42
DDX54-201ENST00000306014 A0A087WUU8 490 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 A0A0G2JMP0 313 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 METTL21EPA6NDL7 271 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 SLC43A1O75387 559 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 PRKCAP17252 672 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 OR3A3P47888 321 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 OR3A2P47893 321 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 TEKQ02763 1124 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 NXNL2Q5VZ03 156 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 FIGLAQ6QHK4 219 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 ZNF619Q8N2I2 560 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 OR4M2Q8NGB6 313 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 RNASE11Q8TAA1 199 aaKnown RBP12.43□□□□□ -0.42
DDX54-201ENST00000306014 CREB3L4Q8TEY5 395 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 TMEM255BQ8WV15 326 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 INSM2Q96T92 566 aaPredicted RBP12.43□□□□□ -0.42
DDX54-201ENST00000306014 RCE1Q9Y256 329 aa12.43□□□□□ -0.42
DDX54-201ENST00000306014 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.42□□□□□ -0.42
DDX54-201ENST00000306014 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.42□□□□□ -0.42
DDX54-201ENST00000306014 NARSO43776 548 aaKnown RBP12.42□□□□□ -0.42
DDX54-201ENST00000306014 SSX4O60224 188 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 CSF3P09919 207 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 CEBPBP17676 345 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 CCDC190Q86UF4 302 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 SLC35F2Q8IXU6 374 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 TOR1AIP2Q8NFQ8 470 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 ARRDC3Q96B67 414 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 KATNB1Q9BVA0 655 aa12.42□□□□□ -0.42
DDX54-201ENST00000306014 KLHL21Q9UJP4 597 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms