RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 LSMEM1Q8N8F7 131 aa14.46□□□□□ -0.09
HERPUD1-201ENST00000300302 ZNF441Q8N8Z8 693 aa14.46□□□□□ -0.09
HERPUD1-201ENST00000300302 APCDD1LQ8NCL9 501 aa14.46□□□□□ -0.09
HERPUD1-201ENST00000300302 RNF217Q8TC41 542 aa14.46□□□□□ -0.09
HERPUD1-201ENST00000300302 TMEM255BQ8WV15 326 aa14.46□□□□□ -0.09
HERPUD1-201ENST00000300302 NRSN2Q9GZP1 204 aa14.46□□□□□ -0.09
HERPUD1-201ENST00000300302 AKIRIN1Q9H9L7 192 aaPredicted RBP14.46□□□□□ -0.09
HERPUD1-201ENST00000300302 POLR1BQ9H9Y6 1135 aa14.46□□□□□ -0.09
HERPUD1-201ENST00000300302 RASSF1Q9NS23 344 aa14.46□□□□□ -0.09
HERPUD1-201ENST00000300302 SCN3BQ9NY72 215 aa14.46□□□□□ -0.09
HERPUD1-201ENST00000300302 PCDHGA1Q9Y5H4 931 aa14.46□□□□□ -0.09
HERPUD1-201ENST00000300302 CDC14CA4D256 554 aa14.46□□□□□ -0.1
HERPUD1-201ENST00000300302 TRIM64CA6NLI5 447 aa14.46□□□□□ -0.1
HERPUD1-201ENST00000300302 MPZL2O60487 215 aa14.46□□□□□ -0.1
HERPUD1-201ENST00000300302 CD63P08962 238 aa14.46□□□□□ -0.1
HERPUD1-201ENST00000300302 TGM1P22735 817 aa14.46□□□□□ -0.1
HERPUD1-201ENST00000300302 ACAA2P42765 397 aaKnown RBP14.46□□□□□ -0.1
HERPUD1-201ENST00000300302 PNLIPRP2P54317 469 aa14.46□□□□□ -0.1
HERPUD1-201ENST00000300302 TSPAN31Q12999 210 aa14.46□□□□□ -0.1
HERPUD1-201ENST00000300302 FOXB2Q5VYV0 432 aa14.46□□□□□ -0.1
HERPUD1-201ENST00000300302 FAM199XQ6PEV8 388 aaPredicted RBP14.46□□□□□ -0.1
HERPUD1-201ENST00000300302 ZNF517Q6ZMY9 492 aaPredicted RBP14.46□□□□□ -0.1
HERPUD1-201ENST00000300302 PRICKLE2Q7Z3G6 844 aa14.46□□□□□ -0.1
HERPUD1-201ENST00000300302 P3H2Q8IVL5 708 aa14.46□□□□□ -0.1
HERPUD1-201ENST00000300302 BPIFB6Q8NFQ5 453 aa14.46□□□□□ -0.1
HERPUD1-201ENST00000300302 PMEPA1Q969W9 287 aa14.46□□□□□ -0.1
HERPUD1-201ENST00000300302 LIN37Q96GY3 246 aaPredicted RBP14.46□□□□□ -0.1
HERPUD1-201ENST00000300302 NDUFA13Q9P0J0 144 aa14.46□□□□□ -0.1
HERPUD1-201ENST00000300302 RNF6Q9Y252 685 aa14.46□□□□□ -0.1
HERPUD1-201ENST00000300302 TPRKBQ9Y3C4 175 aa14.46□□□□□ -0.1
HERPUD1-201ENST00000300302 B3GALT1Q9Y5Z6 326 aa14.46□□□□□ -0.1
HERPUD1-201ENST00000300302 CHP2O43745 196 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 TSPAN2O60636 221 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 SOX14O95416 240 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 JMJD7P0C870 316 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 UBL4AP11441 157 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 ABCD3P28288 659 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 NBL1P41271 181 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 OMPP47874 163 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 COPZ1P61923 177 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 TEKQ02763 1124 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 NCF4Q15080 339 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 BROXQ5VW32 411 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 CDCP2Q5VXM1 449 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 LAIR2Q6ISS4 152 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 ZNF773Q6PK81 442 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 FAM198BQ6UWH4 519 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 SLCO6A1Q86UG4 719 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 NRMQ8IXM6 262 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 PRR22Q8IZ63 422 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 GALNT6Q8NCL4 622 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 OR5L2Q8NGL0 311 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 OR8K3Q8NH51 312 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 NUBPLQ8TB37 319 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 OMA1Q96E52 524 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 FAM46AQ96IP4 442 aaKnown RBP14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 HS6ST2Q96MM7 605 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 TAAR9Q96RI9 348 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 PRSS27Q9BQR3 290 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 SELENONQ9NZV5 590 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 RPS6KB2Q9UBS0 482 aa14.45□□□□□ -0.1
HERPUD1-201ENST00000300302 A0A0B4J2E0 115 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 SMIM31A0A1B0GVY4 71 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 A0A1B0GX12 115 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 GTPBP1O00178 669 aaKnown RBP14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 NGFRP08138 427 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 ENDOUP21128 410 aaKnown RBP14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 FPR3P25089 353 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 FMO3P31513 532 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 LSM11P83369 360 aaKnown RBP eCLIP14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 ULK3Q6PHR2 472 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 SATL1Q86VE3 508 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 CDK20Q8IZL9 346 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 NLGN4XQ8N0W4 816 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 RHOXF1Q8NHV9 184 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 PHOSPHO1Q8TCT1 267 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 TMEM239Q8WW34 195 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 MPP4Q96JB8 637 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 WDR77Q9BQA1 342 aaPredicted RBP14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 DDA1Q9BW61 102 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 CXorf56Q9H5V9 222 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 VCX3AQ9NNX9 186 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 EXOSC3Q9NQT5 275 aaKnown RBP14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 FLRT3Q9NZU0 649 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 CNIH4Q9P003 139 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 ZNF223Q9UK11 482 aaPredicted RBP14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 WDR87Q6ZQQ6 2873 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 A0A1B0GWA3 101 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 ICOSLGO75144 302 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 CSO75390 466 aaKnown RBP14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 STK17BO94768 372 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 STAT5AP42229 794 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 SLC26A5P58743 744 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 EIF3IQ13347 325 aaKnown RBP14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 ALG10BQ5I7T1 473 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 FNDC7Q5VTL7 733 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 SLX4IPQ5VYV7 408 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 TMEM236Q5W0B7 351 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 CASP12Q6UXS9 341 aa14.44□□□□□ -0.1
HERPUD1-201ENST00000300302 RASSF6Q6ZTQ3 369 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms