RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 LSM1O15116 133 aaKnown RBP6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 CASC3O15234 703 aaKnown RBP6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 RGS19P49795 217 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 SGSHP51688 502 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 KIAA1024LP59773 190 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 SLC35A1P78382 337 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 ZNF252P-AS1Q0IIN9 211 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 ARL6IP1Q15041 203 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 GPR19Q15760 415 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 UBE2UQ5VVX9 321 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 PIANPQ8IYJ0 282 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 CCDC71LQ8N9Z2 235 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 PIGCQ92535 297 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 PTERQ96BW5 349 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 COG8Q96MW5 612 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 PRRX2Q99811 253 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 SYT3Q9BQG1 590 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 ANKRD10Q9NXR5 420 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 CXXC1Q9P0U4 656 aaPredicted RBP6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 ZNF337Q9Y3M9 751 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 LOXL2Q9Y4K0 774 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 PCDHGA10Q9Y5H3 936 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 KDM3BQ7LBC6 1761 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 A0A0G2JMP0 313 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 LOC285095A0A1B0GVY8 99 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 MKRN2OSH3BPM6 223 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 B4GAT1O43505 415 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 SUSD5O60279 629 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 HPRP00739 348 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 SERPINA5P05154 406 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 NPR2P20594 1047 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 GABRR1P24046 479 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 DPP4P27487 766 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 KIR2DL3P43628 341 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 RGRP47804 291 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 HTR5AP47898 357 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 HBMQ6B0K9 141 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 TECPR1Q7Z6L1 1165 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 ZNF808Q8N4W9 903 aaPredicted RBP6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 OR4M2Q8NGB6 313 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 CNIH3Q8TBE1 160 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 CRYGNQ8WXF5 182 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 RFT1Q96AA3 541 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 ZNF775Q96BV0 537 aaPredicted RBP6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 BOD1Q96IK1 185 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 IP6K3Q96PC2 410 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 CITED4Q96RK1 184 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 TREM1Q9NP99 234 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 HAO2Q9NYQ3 351 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 OR14J1Q9UGF5 321 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 TMA7Q9Y2S6 64 aaKnown RBP6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 MMACHCQ9Y4U1 282 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 BTAF1O14981 1849 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 TRAPPC2LH3BP13 241 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 HOXC11O43248 304 aaPredicted RBP6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 GJB3O75712 270 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 CBX7O95931 251 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 ADAP00813 363 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 PTGER1P34995 402 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 ART1P52961 327 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 ADPRHP54922 357 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 RPP30P78346 268 aaKnown RBP6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 POU3F1Q03052 451 aaPredicted RBP6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 SMAD2Q15796 467 aaKnown RBP6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 SLC36A2Q495M3 483 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 FAM76BQ5HYJ3 339 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 BORAQ6PGQ7 559 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 DPY19L4Q7Z388 723 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 MKXQ8IYA7 352 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 LSMEM2Q8N112 164 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 CSNK2A3Q8NEV1 391 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 SDR9C7Q8NEX9 313 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 OR51L1Q8NGJ5 315 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 OR1N1Q8NGS0 311 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 NDNFQ8TB73 568 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 ZNF845Q96IR2 970 aaPredicted RBP6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 SLC22A12Q96S37 553 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 PLEKHJ1Q9NW61 149 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 CARD8Q9Y2G2 431 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 ZCWPW2A0A1B0GU75 182 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 BTBD17A6NE02 478 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 SHOXO15266 292 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 LRRTM2O43300 516 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 ITGB2P05107 769 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 ZNF44P15621 663 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 GGT1P19440 569 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 MAGEA3P43357 314 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 ERVK-25P63136 954 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 ADARB1P78563 741 aaKnown RBP6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 FAM189BP81408 668 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 ZBED5Q49AG3 693 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 ZNF789Q5FWF6 425 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 AGAP7PQ5VUJ5 663 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 TSSK4Q6SA08 328 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 CMTM1Q8IZ96 169 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 PIAS4Q8N2W9 510 aaPredicted RBP6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 MINDY1Q8N5J2 469 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 SLC37A3Q8NCC5 494 aa6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 GOT1L1Q8NHS2 421 aaPredicted RBP6.49□□□□□ -1.37
GAPVD1-202ENST00000297933 DUSP19Q8WTR2 217 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms