RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 HOXC4P09017 264 aaPredicted RBP18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 NID1P14543 1247 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 RPS4Y1P22090 263 aaKnown RBP18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 CTHP32929 405 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 SRP54P61011 504 aaKnown RBP18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 PLAURQ03405 335 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 NIPAL3Q6P499 406 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 THSD4Q6ZMP0 1018 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 ZAR1Q86SH2 424 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 ZNF761Q86XN6 746 aaPredicted RBP18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 TMEM99Q8N816 258 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 OR52N1Q8NH53 320 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 DMRTB1Q96MA1 342 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 CD180Q99467 661 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 CLDND1Q9NY35 253 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 NCKAP1Q9Y2A7 1128 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 N6AMT1Q9Y5N5 214 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 CDHR4A6H8M9 788 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 J3QRE1 110 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 BHLHE40O14503 412 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 HRO43593 1189 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 LYPD3O95274 346 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 DBIP07108 87 aaKnown RBP18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 TBXA2RP21731 343 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 PPP1CAP62136 330 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 BCL2A1Q16548 175 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 KLHL12Q53G59 568 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 ZC3H14Q6PJT7 736 aaKnown RBP18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 TMEM91Q6ZNR0 172 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 TOR1AIP2Q8NFQ8 470 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 OR13C2Q8NGS9 318 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 BRIX1Q8TDN6 353 aaKnown RBP18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 RERGQ96A58 199 aaPredicted RBP18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 SENP5Q96HI0 755 aaPredicted RBP18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 TIMP4Q99727 224 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 NKX2-4Q9H2Z4 354 aa18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 KRCC1Q9NPI7 259 aaPredicted RBP18.51■□□□□ 0.55
SCUBE1-201ENST00000290460 HCRTR1O43613 425 aa18.5■□□□□ 0.55
SCUBE1-201ENST00000290460 ATP1B1P05026 303 aa18.5■□□□□ 0.55
SCUBE1-201ENST00000290460 PAICSP22234 425 aaKnown RBP18.5■□□□□ 0.55
SCUBE1-201ENST00000290460 HNRNPA2B1P22626 353 aaKnown RBP18.5■□□□□ 0.55
SCUBE1-201ENST00000290460 LBX1P52954 281 aa18.5■□□□□ 0.55
SCUBE1-201ENST00000290460 OR52L1Q8NGH7 329 aa18.5■□□□□ 0.55
SCUBE1-201ENST00000290460 GRHL3Q8TE85 626 aa18.5■□□□□ 0.55
SCUBE1-201ENST00000290460 DNAJA4Q8WW22 397 aaPredicted RBP18.5■□□□□ 0.55
SCUBE1-201ENST00000290460 ST6GAL2Q96JF0 529 aa18.5■□□□□ 0.55
SCUBE1-201ENST00000290460 HS6ST2Q96MM7 605 aa18.5■□□□□ 0.55
SCUBE1-201ENST00000290460 RNF32Q9H0A6 362 aa18.5■□□□□ 0.55
SCUBE1-201ENST00000290460 TCEAL2Q9H3H9 227 aaPredicted RBP18.5■□□□□ 0.55
SCUBE1-201ENST00000290460 DDX28Q9NUL7 540 aaKnown RBP18.5■□□□□ 0.55
SCUBE1-201ENST00000290460 TRAV27A0A087WT01 109 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 CCDC182A6NF36 153 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 CYR61O00622 381 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 REM1O75628 298 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 APBB3O95704 486 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 GABRA3P34903 492 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 PPP3R1P63098 170 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 CSTF1Q05048 431 aaKnown RBP18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 DLX2Q07687 328 aaPredicted RBP18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 ACSM1Q08AH1 577 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 SRSF5Q13243 272 aaKnown RBP18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 PRICKLE4Q2TBC4 344 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 ZNF362Q5T0B9 420 aaPredicted RBP18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 SMAP2Q8WU79 429 aaPredicted RBP18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 CDCA3Q99618 268 aaPredicted RBP18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 ALG8Q9BVK2 526 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 B3GAT2Q9NPZ5 323 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 MAT2BQ9NZL9 334 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 A0A0B4J293 547 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 B4DXG7 233 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 BMP7P18075 431 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 ZNF10P21506 573 aaPredicted RBP18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 KIR2DL3P43628 341 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 SLC16A1P53985 500 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 ZNF542PQ5EBM4 170 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 DGAT2L6Q6ZPD8 337 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 GLCCI1Q86VQ1 547 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 NR2C2APQ86WQ0 139 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 Q8N402 240 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 ACBD7Q8N6N7 88 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 ZNF614Q8N883 585 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 CDRT4Q8N9R6 151 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 RNF31Q96EP0 1072 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 LYRM4Q9HD34 91 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 DUSP22Q9NRW4 184 aa18.49■□□□□ 0.55
SCUBE1-201ENST00000290460 HYAL3O43820 417 aaPredicted RBP18.48■□□□□ 0.55
SCUBE1-201ENST00000290460 RFPL3O75679 317 aa18.48■□□□□ 0.55
SCUBE1-201ENST00000290460 GPR75O95800 540 aa18.48■□□□□ 0.55
SCUBE1-201ENST00000290460 CTSBP07858 339 aa18.48■□□□□ 0.55
SCUBE1-201ENST00000290460 MRPL3P09001 348 aaKnown RBP18.48■□□□□ 0.55
SCUBE1-201ENST00000290460 SAGP10523 405 aaPredicted RBP18.48■□□□□ 0.55
SCUBE1-201ENST00000290460 IL18Q14116 193 aa18.48■□□□□ 0.55
SCUBE1-201ENST00000290460 TBRG1Q3YBR2 411 aa18.48■□□□□ 0.55
SCUBE1-201ENST00000290460 EXOSC6Q5RKV6 272 aaKnown RBP18.48■□□□□ 0.55
SCUBE1-201ENST00000290460 MEPCEQ7L2J0 689 aaKnown RBP18.48■□□□□ 0.55
SCUBE1-201ENST00000290460 ZNF438Q7Z4V0 828 aa18.48■□□□□ 0.55
SCUBE1-201ENST00000290460 GID4Q8IVV7 300 aa18.48■□□□□ 0.55
SCUBE1-201ENST00000290460 ASB12Q8WXK4 309 aa18.48■□□□□ 0.55
SCUBE1-201ENST00000290460 KISS1RQ969F8 398 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms