RNA–Protein interactions for RNA: ENST00000290178.4

PAXBP1-201, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PAXBP1, Length 2,564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-201ENST00000290178 CLDND1Q9NY35 253 aa20.13■□□□□ 0.81
PAXBP1-201ENST00000290178 HLA-DPB1P04440 258 aa20.13■□□□□ 0.81
PAXBP1-201ENST00000290178 CTSBP07858 339 aa20.13■□□□□ 0.81
PAXBP1-201ENST00000290178 KIR2DL3P43628 341 aa20.13■□□□□ 0.81
PAXBP1-201ENST00000290178 SRP54P61011 504 aaKnown RBP20.13■□□□□ 0.81
PAXBP1-201ENST00000290178 HYAL1Q12794 435 aa20.13■□□□□ 0.81
PAXBP1-201ENST00000290178 BCL2A1Q16548 175 aa20.13■□□□□ 0.81
PAXBP1-201ENST00000290178 DGAT2L6Q6ZPD8 337 aa20.13■□□□□ 0.81
PAXBP1-201ENST00000290178 TRIM48Q8IWZ4 208 aa20.13■□□□□ 0.81
PAXBP1-201ENST00000290178 OR13C2Q8NGS9 318 aa20.13■□□□□ 0.81
PAXBP1-201ENST00000290178 CD180Q99467 661 aa20.13■□□□□ 0.81
PAXBP1-201ENST00000290178 ZFYVE21Q9BQ24 234 aa20.13■□□□□ 0.81
PAXBP1-201ENST00000290178 RNF32Q9H0A6 362 aa20.13■□□□□ 0.81
PAXBP1-201ENST00000290178 TCEAL2Q9H3H9 227 aaPredicted RBP20.13■□□□□ 0.81
PAXBP1-201ENST00000290178 NPAP1Q9NZP6 1156 aa20.13■□□□□ 0.81
PAXBP1-201ENST00000290178 J3QRE1 110 aa20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 BHLHE40O14503 412 aa20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 LYPD3O95274 346 aa20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 TBXA2RP21731 343 aa20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 GABRA3P34903 492 aa20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 SLC16A1P53985 500 aa20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 ABHD13Q7L211 337 aa20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 SAMD14Q8IZD0 417 aaPredicted RBP20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 CAMKVQ8NCB2 501 aa20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 GRHL3Q8TE85 626 aa20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 NKX2-4Q9H2Z4 354 aa20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 NCKAP1Q9Y2A7 1128 aa20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 RFPL3O75679 317 aa20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 MRPL3P09001 348 aaKnown RBP20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 CLUP10909 449 aa20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 NID1P14543 1247 aa20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 TCEA1P23193 301 aaKnown RBP20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 DLX2Q07687 328 aaPredicted RBP20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 TBRG1Q3YBR2 411 aa20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 EIPR1Q53HC9 387 aa20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 NIPAL3Q6P499 406 aa20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 NR2C2APQ86WQ0 139 aa20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 FANCMQ8IYD8 2048 aa20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 OR52N1Q8NH53 320 aa20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 DNAJA4Q8WW22 397 aaPredicted RBP20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 PTP4A1Q93096 173 aa20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 HS6ST2Q96MM7 605 aa20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 BEX2Q9BXY8 128 aa20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 B3GAT2Q9NPZ5 323 aa20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 KNL1Q8NG31 2342 aa20.12■□□□□ 0.81
PAXBP1-201ENST00000290178 TRAV27A0A087WT01 109 aa20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 A0A0B4J293 547 aa20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 CDHR4A6H8M9 788 aa20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 CCDC182A6NF36 153 aa20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 URADA6NGE7 173 aa20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 B4DXG7 233 aa20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 DBIP07108 87 aaKnown RBP20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 THBS1P07996 1170 aa20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 PAICSP22234 425 aaKnown RBP20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 ZNF438Q7Z4V0 828 aa20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 ZNF614Q8N883 585 aa20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 DTX3Q8N9I9 347 aa20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 OR51A7Q8NH64 312 aa20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 BRIX1Q8TDN6 353 aaKnown RBP20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 RERGQ96A58 199 aaPredicted RBP20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 RNF31Q96EP0 1072 aa20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 OR51V1Q9H2C8 321 aa20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 PPP1R3EQ9H7J1 279 aa20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 USP36Q9P275 1121 aaKnown RBP20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 NUFIP1Q9UHK0 495 aaKnown RBP20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 CYR61O00622 381 aa20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 CHST10O43529 356 aa20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 CELA2BP08218 269 aaPredicted RBP20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 RPS4Y1P22090 263 aaKnown RBP20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 CTHP32929 405 aa20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 PPP3R1P63098 170 aa20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 IL18Q14116 193 aa20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 PRICKLE4Q2TBC4 344 aa20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 MEPCEQ7L2J0 689 aaKnown RBP20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 Q8N402 240 aa20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 ALG8Q9BVK2 526 aa20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 IFT27Q9BW83 186 aa20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 PPIL3Q9H2H8 161 aaKnown RBP20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 MAT2BQ9NZL9 334 aa20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 FBXL4Q9UKA2 621 aa20.11■□□□□ 0.81
PAXBP1-201ENST00000290178 A6NL46 340 aa20.1■□□□□ 0.81
PAXBP1-201ENST00000290178 SGK494L7N484 410 aa20.1■□□□□ 0.81
PAXBP1-201ENST00000290178 HOXC4P09017 264 aaPredicted RBP20.1■□□□□ 0.81
PAXBP1-201ENST00000290178 SLC2A2P11168 524 aaPredicted RBP20.1■□□□□ 0.81
PAXBP1-201ENST00000290178 BMP7P18075 431 aa20.1■□□□□ 0.81
PAXBP1-201ENST00000290178 NOS3P29474 1203 aa20.1■□□□□ 0.81
PAXBP1-201ENST00000290178 TMEM44Q2T9K0 475 aa20.1■□□□□ 0.81
PAXBP1-201ENST00000290178 ACBD7Q8N6N7 88 aa20.1■□□□□ 0.81
PAXBP1-201ENST00000290178 OR10H4Q8NGA5 316 aa20.1■□□□□ 0.81
PAXBP1-201ENST00000290178 OR52L1Q8NGH7 329 aa20.1■□□□□ 0.81
PAXBP1-201ENST00000290178 RBCK1Q9BYM8 510 aa20.1■□□□□ 0.81
PAXBP1-201ENST00000290178 MEPEQ9NQ76 525 aaPredicted RBP20.1■□□□□ 0.81
PAXBP1-201ENST00000290178 BOLA1Q9Y3E2 137 aa20.1■□□□□ 0.81
PAXBP1-201ENST00000290178 E9PI62 339 aa20.1■□□□□ 0.81
PAXBP1-201ENST00000290178 RNF13O43567 381 aa20.1■□□□□ 0.81
PAXBP1-201ENST00000290178 APBB3O95704 486 aa20.1■□□□□ 0.81
PAXBP1-201ENST00000290178 ATP1B1P05026 303 aa20.1■□□□□ 0.81
PAXBP1-201ENST00000290178 SAGP10523 405 aaPredicted RBP20.1■□□□□ 0.81
PAXBP1-201ENST00000290178 HNRNPA2B1P22626 353 aaKnown RBP20.1■□□□□ 0.81
PAXBP1-201ENST00000290178 RPS7P62081 194 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms