RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 GLTPD2A6NH11 291 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 ACOD1A6NK06 481 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 CRHP06850 196 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 USP17L7P0C7H9 530 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 GKN3PP0CG01 181 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 OR8G3PP0DMU2 310 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 ETFAP13804 333 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 GPX2P18283 190 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 C5AR1P21730 350 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 TBXA2RP21731 343 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 ACKR3P25106 362 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 S100A2P29034 98 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 MPIP34949 423 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 AKR1C3P42330 323 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 CDX1P47902 265 aaPredicted RBP8.61□□□□□ -1.03
PDGFC-201ENST00000274071 RSU1Q15404 277 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 PLEKHN1Q494U1 663 aaPredicted RBP8.61□□□□□ -1.03
PDGFC-201ENST00000274071 HBMQ6B0K9 141 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 RAB12Q6IQ22 244 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 PRSS45Q7RTY3 260 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 TECPR1Q7Z6L1 1165 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 OR6V1Q8N148 313 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 OR2G2Q8NGZ5 317 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 OR56A3Q8NH54 315 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 THEM6Q8WUY1 208 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 DERL2Q9GZP9 239 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 ZSCAN32Q9NX65 697 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 GAR1Q9NY12 217 aaKnown RBP8.61□□□□□ -1.03
PDGFC-201ENST00000274071 RUVBL1Q9Y265 456 aaKnown RBP8.61□□□□□ -1.03
PDGFC-201ENST00000274071 RASD1Q9Y272 281 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 NPEPPSL1A6NEC2 478 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 A6NLC8 198 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 M0QZ92 97 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 RRP8O43159 456 aaKnown RBP8.61□□□□□ -1.03
PDGFC-201ENST00000274071 FARS2O95363 451 aaKnown RBP8.61□□□□□ -1.03
PDGFC-201ENST00000274071 SOX14O95416 240 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 C1GALT1C1LP0DN25 315 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 TXNP10599 105 aaKnown RBP8.61□□□□□ -1.03
PDGFC-201ENST00000274071 CELP19835 753 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 CPT2P23786 658 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 CERS1P27544 350 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 MAP3K8P41279 467 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 MTNR1BP49286 362 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 VEZF1Q14119 521 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 NDUFAF6Q330K2 333 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 ACOT1Q86TX2 421 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 FAM98AQ8NCA5 519 aaKnown RBP8.61□□□□□ -1.03
PDGFC-201ENST00000274071 OR52B4Q8NGK2 314 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 OR4A4PQ8NGN8 299 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 MAL2Q969L2 176 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 GPR21Q99679 349 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 TM6SF2Q9BZW4 377 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 NOX3Q9HBY0 568 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 TAS2R5Q9NYW4 299 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 FAM50BQ9Y247 325 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 ALPK3Q96L96 1907 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 DSPPQ9NZW4 1301 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 TMEM129A0AVI4 362 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 ZBTB42B2RXF5 422 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 FOXE1O00358 373 aaPredicted RBP8.61□□□□□ -1.03
PDGFC-201ENST00000274071 TLX2O43763 284 aaPredicted RBP8.61□□□□□ -1.03
PDGFC-201ENST00000274071 SOX15O60248 233 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 SCN2BO60939 215 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 GCM2O75603 506 aaPredicted RBP8.61□□□□□ -1.03
PDGFC-201ENST00000274071 OPN1SWP03999 348 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 IQCF3P0C7M6 154 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 BCKDHAP12694 445 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 RPS2P15880 293 aaKnown RBP8.61□□□□□ -1.03
PDGFC-201ENST00000274071 KIR3DL2P43630 455 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 EFNA5P52803 228 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 ART1P52961 327 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 DLX5P56178 289 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 TPI1P60174 286 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 SELENOWP63302 87 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 GLO1Q04760 184 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 LAMTOR4Q0VGL1 99 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 TMEM132DQ14C87 1099 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 HEPACAMQ14CZ8 416 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 MPPED2Q15777 294 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 DCAF12L2Q5VW00 463 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 MFSD14CQ5VZR4 134 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 ADAM5Q6NVV9 412 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 PLPPR4Q7Z2D5 763 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 LRRTM1Q86UE6 522 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 OR8J1Q8NGP2 316 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 RNFT2Q96EX2 444 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 CPNE2Q96FN4 548 aaPredicted RBP8.61□□□□□ -1.03
PDGFC-201ENST00000274071 GINS4Q9BRT9 223 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 NCOR1P1Q9H4R4 102 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 BCO1Q9HAY6 547 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 NDOR1Q9UHB4 597 aa8.61□□□□□ -1.03
PDGFC-201ENST00000274071 LRRC37A2A6NM11 1700 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 hCG_1809904A0A1W2PP81 198 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 A0A1W2PR64 198 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 A0A1W2PRV1 198 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 TRAPPC13A5PLN9 417 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 FAM227AF5H4B4 570 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 OR7A17O14581 309 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 TNFRSF10BO14763 440 aa8.6□□□□□ -1.03
PDGFC-201ENST00000274071 FADS1O60427 444 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms