RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 C4orf36Q96KX1 117 aa25.57■■□□□ 1.68
CBX4-201ENST00000269397 INSM2Q96T92 566 aaPredicted RBP25.57■■□□□ 1.68
CBX4-201ENST00000269397 FBXL4Q9UKA2 621 aa25.57■■□□□ 1.68
CBX4-201ENST00000269397 MDC1Q14676 2089 aaKnown RBP25.57■■□□□ 1.68
CBX4-201ENST00000269397 MT-ND4P03905 459 aa25.57■■□□□ 1.68
CBX4-201ENST00000269397 F3P13726 295 aa25.57■■□□□ 1.68
CBX4-201ENST00000269397 SNRPBP14678 240 aaKnown RBP25.57■■□□□ 1.68
CBX4-201ENST00000269397 DRD5P21918 477 aa25.57■■□□□ 1.68
CBX4-201ENST00000269397 F8A1P23610 371 aa25.57■■□□□ 1.68
CBX4-201ENST00000269397 MPIP34949 423 aa25.57■■□□□ 1.68
CBX4-201ENST00000269397 OR12D2P58182 307 aa25.57■■□□□ 1.68
CBX4-201ENST00000269397 RGS1Q08116 209 aa25.57■■□□□ 1.68
CBX4-201ENST00000269397 SLC48A1Q6P1K1 146 aa25.57■■□□□ 1.68
CBX4-201ENST00000269397 GLRX5Q86SX6 157 aa25.57■■□□□ 1.68
CBX4-201ENST00000269397 FANK1Q8TC84 345 aa25.57■■□□□ 1.68
CBX4-201ENST00000269397 LRRC20Q8TCA0 184 aa25.57■■□□□ 1.68
CBX4-201ENST00000269397 COX14Q96I36 57 aa25.57■■□□□ 1.68
CBX4-201ENST00000269397 SYNDIG1Q9H7V2 258 aa25.57■■□□□ 1.68
CBX4-201ENST00000269397 CES1P1Q9UKY3 287 aa25.57■■□□□ 1.68
CBX4-201ENST00000269397 ZMIZ1Q9ULJ6 1067 aa25.57■■□□□ 1.68
CBX4-201ENST00000269397 TRPM6Q9BX84 2022 aa25.57■■□□□ 1.68
CBX4-201ENST00000269397 LOC105378220A0A1B0GUY1 285 aaPredicted RBP25.56■■□□□ 1.68
CBX4-201ENST00000269397 MAGEB4O15481 346 aaPredicted RBP25.56■■□□□ 1.68
CBX4-201ENST00000269397 TPOP07202 933 aa25.56■■□□□ 1.68
CBX4-201ENST00000269397 MAKP20794 623 aa25.56■■□□□ 1.68
CBX4-201ENST00000269397 TEAD1P28347 426 aa25.56■■□□□ 1.68
CBX4-201ENST00000269397 NOS3P29474 1203 aa25.56■■□□□ 1.68
CBX4-201ENST00000269397 PUS10Q3MIT2 529 aaKnown RBP25.56■■□□□ 1.68
CBX4-201ENST00000269397 WDR88Q6ZMY6 472 aa25.56■■□□□ 1.68
CBX4-201ENST00000269397 ERN2Q76MJ5 926 aaKnown RBP25.56■■□□□ 1.68
CBX4-201ENST00000269397 PRSS45Q7RTY3 260 aa25.56■■□□□ 1.68
CBX4-201ENST00000269397 LUZP2Q86TE4 346 aa25.56■■□□□ 1.68
CBX4-201ENST00000269397 IZUMO1Q8IYV9 350 aa25.56■■□□□ 1.68
CBX4-201ENST00000269397 CYB561A3Q8NBI2 242 aa25.56■■□□□ 1.68
CBX4-201ENST00000269397 KISS1RQ969F8 398 aaPredicted RBP25.56■■□□□ 1.68
CBX4-201ENST00000269397 YIPF5Q969M3 257 aa25.56■■□□□ 1.68
CBX4-201ENST00000269397 ANKRD19PQ9H560 264 aa25.56■■□□□ 1.68
CBX4-201ENST00000269397 NKIRAS2Q9NYR9 191 aa25.56■■□□□ 1.68
CBX4-201ENST00000269397 ZBTB32Q9Y2Y4 487 aaPredicted RBP25.56■■□□□ 1.68
CBX4-201ENST00000269397 GYPBP06028 91 aa25.56■■□□□ 1.68
CBX4-201ENST00000269397 ANKRD34CP0C6C1 535 aa25.56■■□□□ 1.68
CBX4-201ENST00000269397 ADH5P11766 374 aa25.56■■□□□ 1.68
CBX4-201ENST00000269397 GALP22466 123 aa25.56■■□□□ 1.68
CBX4-201ENST00000269397 HSD17B2P37059 387 aa25.56■■□□□ 1.68
CBX4-201ENST00000269397 CDK3Q00526 305 aa25.56■■□□□ 1.68
CBX4-201ENST00000269397 ST3GAL2Q16842 350 aa25.56■■□□□ 1.68
CBX4-201ENST00000269397 LGALSLQ3ZCW2 172 aaPredicted RBP25.56■■□□□ 1.68
CBX4-201ENST00000269397 PRPF38BQ5VTL8 546 aaKnown RBP25.56■■□□□ 1.68
CBX4-201ENST00000269397 PYHIN1Q6K0P9 492 aa25.56■■□□□ 1.68
CBX4-201ENST00000269397 FRRS1Q6ZNA5 592 aa25.56■■□□□ 1.68
CBX4-201ENST00000269397 PTP4A1Q93096 173 aa25.56■■□□□ 1.68
CBX4-201ENST00000269397 ORAI3Q9BRQ5 295 aa25.56■■□□□ 1.68
CBX4-201ENST00000269397 ZNF443Q9Y2A4 671 aaPredicted RBP25.56■■□□□ 1.68
CBX4-201ENST00000269397 A0A1W2PRG6 482 aa25.55■■□□□ 1.68
CBX4-201ENST00000269397 LINC00862A6NCI5 91 aa25.55■■□□□ 1.68
CBX4-201ENST00000269397 PRKAR1BP31321 381 aa25.55■■□□□ 1.68
CBX4-201ENST00000269397 BDH1Q02338 343 aa25.55■■□□□ 1.68
CBX4-201ENST00000269397 GALEQ14376 348 aa25.55■■□□□ 1.68
CBX4-201ENST00000269397 ZNF836Q6ZNA1 936 aa25.55■■□□□ 1.68
CBX4-201ENST00000269397 ADGRD2Q7Z7M1 963 aa25.55■■□□□ 1.68
CBX4-201ENST00000269397 GID4Q8IVV7 300 aa25.55■■□□□ 1.68
CBX4-201ENST00000269397 MRPL15Q9P015 296 aaKnown RBP25.55■■□□□ 1.68
CBX4-201ENST00000269397 GIMAP1-GIMAP5A0A087WTJ2 511 aa25.55■■□□□ 1.68
CBX4-201ENST00000269397 IGLON5A6NGN9 336 aa25.55■■□□□ 1.68
CBX4-201ENST00000269397 UNC119BA6NIH7 251 aa25.55■■□□□ 1.68
CBX4-201ENST00000269397 GPR68Q15743 365 aa25.55■■□□□ 1.68
CBX4-201ENST00000269397 THSD4Q6ZMP0 1018 aa25.55■■□□□ 1.68
CBX4-201ENST00000269397 FBXL6Q8N531 539 aa25.55■■□□□ 1.68
CBX4-201ENST00000269397 GIMAP5Q96F15 307 aa25.55■■□□□ 1.68
CBX4-201ENST00000269397 KCNK6Q9Y257 313 aa25.55■■□□□ 1.68
CBX4-201ENST00000269397 NUBP2Q9Y5Y2 271 aa25.55■■□□□ 1.68
CBX4-201ENST00000269397 OR52A4PA6NMU1 304 aa25.54■■□□□ 1.68
CBX4-201ENST00000269397 VSX2P58304 361 aaPredicted RBP25.54■■□□□ 1.68
CBX4-201ENST00000269397 SNRPNP63162 240 aaKnown RBP25.54■■□□□ 1.68
CBX4-201ENST00000269397 MRM1Q6IN84 353 aaKnown RBP25.54■■□□□ 1.68
CBX4-201ENST00000269397 GIMAP1Q8WWP7 306 aa25.54■■□□□ 1.68
CBX4-201ENST00000269397 AHCYL2Q96HN2 611 aaKnown RBP25.54■■□□□ 1.68
CBX4-201ENST00000269397 NDC1Q9BTX1 674 aa25.54■■□□□ 1.68
CBX4-201ENST00000269397 JAM3Q9BX67 310 aa25.54■■□□□ 1.68
CBX4-201ENST00000269397 GSDMCQ9BYG8 508 aa25.54■■□□□ 1.68
CBX4-201ENST00000269397 SLC6A20Q9NP91 592 aa25.54■■□□□ 1.68
CBX4-201ENST00000269397 MRPS30Q9NP92 439 aaKnown RBP25.54■■□□□ 1.68
CBX4-201ENST00000269397 SATB2Q9UPW6 733 aa25.54■■□□□ 1.68
CBX4-201ENST00000269397 MPC2O95563 127 aa25.54■■□□□ 1.68
CBX4-201ENST00000269397 ERVFC1P60507 584 aa25.54■■□□□ 1.68
CBX4-201ENST00000269397 ZSWIM7Q19AV6 140 aa25.54■■□□□ 1.68
CBX4-201ENST00000269397 HNRNPA1L2Q32P51 320 aaKnown RBP25.54■■□□□ 1.68
CBX4-201ENST00000269397 PRAMEF8Q5VWM4 474 aa25.54■■□□□ 1.68
CBX4-201ENST00000269397 PRAMEF7Q5VXH5 474 aa25.54■■□□□ 1.68
CBX4-201ENST00000269397 IDO2Q6ZQW0 420 aa25.54■■□□□ 1.68
CBX4-201ENST00000269397 PIAS4Q8N2W9 510 aaPredicted RBP25.54■■□□□ 1.68
CBX4-201ENST00000269397 CEP76Q8TAP6 659 aa25.54■■□□□ 1.68
CBX4-201ENST00000269397 NR4A3Q92570 626 aa25.54■■□□□ 1.68
CBX4-201ENST00000269397 KCTD12Q96CX2 325 aaKnown RBP25.54■■□□□ 1.68
CBX4-201ENST00000269397 DEFB118Q96PH6 123 aa25.54■■□□□ 1.68
CBX4-201ENST00000269397 C1QTNF2Q9BXJ5 285 aa25.54■■□□□ 1.68
CBX4-201ENST00000269397 ACTRT3Q9BYD9 372 aa25.54■■□□□ 1.68
CBX4-201ENST00000269397 SIDT1Q9NXL6 827 aaKnown RBP25.54■■□□□ 1.68
CBX4-201ENST00000269397 B8ZZF3 427 aa25.53■■□□□ 1.68
CBX4-201ENST00000269397 NARSO43776 548 aaKnown RBP25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms