RNA–Protein interactions for RNA: ENST00000267935.12

COMMD4-201, Transcript of COMM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD4, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-201ENST00000267935 MAP3K8P41279 467 aa12.67□□□□□ -0.38
COMMD4-201ENST00000267935 ASMTP46597 345 aa12.67□□□□□ -0.38
COMMD4-201ENST00000267935 DNAJB13P59910 316 aa12.67□□□□□ -0.38
COMMD4-201ENST00000267935 POU6F2P78424 691 aaPredicted RBP12.67□□□□□ -0.38
COMMD4-201ENST00000267935 NCMAPQ5T1S8 102 aa12.67□□□□□ -0.38
COMMD4-201ENST00000267935 IFT20Q8IY31 132 aa12.67□□□□□ -0.38
COMMD4-201ENST00000267935 CCDC63Q8NA47 563 aa12.67□□□□□ -0.38
COMMD4-201ENST00000267935 SLC16A11Q8NCK7 471 aa12.67□□□□□ -0.38
COMMD4-201ENST00000267935 PHOSPHO1Q8TCT1 267 aa12.67□□□□□ -0.38
COMMD4-201ENST00000267935 JADE3Q92613 823 aa12.67□□□□□ -0.38
COMMD4-201ENST00000267935 MUCL1Q96DR8 90 aa12.67□□□□□ -0.38
COMMD4-201ENST00000267935 EGLN2Q96KS0 407 aa12.67□□□□□ -0.38
COMMD4-201ENST00000267935 HS6ST2Q96MM7 605 aa12.67□□□□□ -0.38
COMMD4-201ENST00000267935 CCT7Q99832 543 aa12.67□□□□□ -0.38
COMMD4-201ENST00000267935 BTBD2Q9BX70 525 aa12.67□□□□□ -0.38
COMMD4-201ENST00000267935 BARX1Q9HBU1 254 aaPredicted RBP12.67□□□□□ -0.38
COMMD4-201ENST00000267935 FAIMQ9NVQ4 179 aa12.67□□□□□ -0.38
COMMD4-201ENST00000267935 TMED5Q9Y3A6 229 aa12.67□□□□□ -0.38
COMMD4-201ENST00000267935 DNHD1Q96M86 4753 aa12.66□□□□□ -0.38
COMMD4-201ENST00000267935 OVOL3O00110 214 aa12.66□□□□□ -0.38
COMMD4-201ENST00000267935 ZNF195O14628 629 aa12.66□□□□□ -0.38
COMMD4-201ENST00000267935 NEFHP12036 1026 aa12.66□□□□□ -0.38
COMMD4-201ENST00000267935 GCAP28676 217 aa12.66□□□□□ -0.38
COMMD4-201ENST00000267935 RPL3P39023 403 aaKnown RBP12.66□□□□□ -0.38
COMMD4-201ENST00000267935 ITGADQ13349 1161 aa12.66□□□□□ -0.38
COMMD4-201ENST00000267935 KIAA0040Q15053 153 aa12.66□□□□□ -0.38
COMMD4-201ENST00000267935 DUSP5Q16690 384 aa12.66□□□□□ -0.38
COMMD4-201ENST00000267935 TMEM176BQ3YBM2 270 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-201ENST00000267935 HMBOX1Q6NT76 420 aa12.66□□□□□ -0.38
COMMD4-201ENST00000267935 LRIG3Q6UXM1 1119 aa12.66□□□□□ -0.38
COMMD4-201ENST00000267935 DNAJC14Q6Y2X3 702 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-201ENST00000267935 FRMD7Q6ZUT3 714 aa12.66□□□□□ -0.38
COMMD4-201ENST00000267935 FCRLAQ7L513 359 aa12.66□□□□□ -0.38
COMMD4-201ENST00000267935 TUSC5Q8IXB3 177 aa12.66□□□□□ -0.38
COMMD4-201ENST00000267935 RAB3IL1Q8TBN0 382 aa12.66□□□□□ -0.38
COMMD4-201ENST00000267935 CIDECQ96AQ7 238 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-201ENST00000267935 MTERF3Q96E29 417 aa12.66□□□□□ -0.38
COMMD4-201ENST00000267935 STACQ99469 402 aa12.66□□□□□ -0.38
COMMD4-201ENST00000267935 GIN1Q9NXP7 522 aa12.66□□□□□ -0.38
COMMD4-201ENST00000267935 KLHL13Q9P2N7 655 aa12.66□□□□□ -0.38
COMMD4-201ENST00000267935 TBK1Q9UHD2 729 aa12.66□□□□□ -0.38
COMMD4-201ENST00000267935 LIPT1Q9Y234 373 aa12.66□□□□□ -0.38
COMMD4-201ENST00000267935 GPC6Q9Y625 555 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-201ENST00000267935 RAI1Q7Z5J4 1906 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-201ENST00000267935 ESPNB1AK53 854 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 NPIPB8E9PQR5 432 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 G3V2L1 256 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 RIPK2O43353 540 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 ADAP00813 363 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 KRT16P08779 473 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 LINGO3P0C6S8 592 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 ACP2P11117 423 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 CPA3P15088 417 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 ECHS1P30084 290 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 SLC7A1P30825 629 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 P2RX1P51575 399 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 SUMO3P55854 103 aaPredicted RBP12.65□□□□□ -0.38
COMMD4-201ENST00000267935 TAB1Q15750 504 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 ZNF239Q16600 458 aaKnown RBP12.65□□□□□ -0.38
COMMD4-201ENST00000267935 ANKRD26P1Q6NSI1 321 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 TFAP2EQ6VUC0 442 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 GABRG1Q8N1C3 465 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 NATD1Q8N6N6 113 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 NOA1Q8NC60 698 aaKnown RBP12.65□□□□□ -0.38
COMMD4-201ENST00000267935 POC1BQ8TC44 478 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 PIWIL2Q8TC59 973 aaKnown RBP12.65□□□□□ -0.38
COMMD4-201ENST00000267935 RNF128Q8TEB7 428 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 ABHD3Q8WU67 409 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 TSSK3Q96PN8 268 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 RHNO1Q9BSD3 238 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 YAE1D1Q9NRH1 226 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 DUSP22Q9NRW4 184 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 KLHL9Q9P2J3 617 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 MID2Q9UJV3 735 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 ADAM21Q9UKJ8 722 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 FAF1Q9UNN5 650 aaPredicted RBP12.65□□□□□ -0.38
COMMD4-201ENST00000267935 ACTL7BQ9Y614 415 aa12.65□□□□□ -0.38
COMMD4-201ENST00000267935 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.64□□□□□ -0.39
COMMD4-201ENST00000267935 RNF212BA8MTL3 300 aa12.64□□□□□ -0.39
COMMD4-201ENST00000267935 TMEM114B3SHH9 223 aa12.64□□□□□ -0.39
COMMD4-201ENST00000267935 AZIN1O14977 448 aa12.64□□□□□ -0.39
COMMD4-201ENST00000267935 GCM2O75603 506 aaPredicted RBP12.64□□□□□ -0.39
COMMD4-201ENST00000267935 SOD3P08294 240 aa12.64□□□□□ -0.39
COMMD4-201ENST00000267935 DANCRP0C864 163 aa12.64□□□□□ -0.39
COMMD4-201ENST00000267935 NID1P14543 1247 aa12.64□□□□□ -0.39
COMMD4-201ENST00000267935 MAPK1P28482 360 aa12.64□□□□□ -0.39
COMMD4-201ENST00000267935 FRKP42685 505 aaPredicted RBP12.64□□□□□ -0.39
COMMD4-201ENST00000267935 RAC3P60763 192 aa12.64□□□□□ -0.39
COMMD4-201ENST00000267935 TP53BP2Q13625 1128 aa12.64□□□□□ -0.39
COMMD4-201ENST00000267935 MLC1Q15049 377 aa12.64□□□□□ -0.39
COMMD4-201ENST00000267935 ZNF672Q499Z4 452 aaPredicted RBP12.64□□□□□ -0.39
COMMD4-201ENST00000267935 BHLHA15Q7RTS1 189 aaPredicted RBP12.64□□□□□ -0.39
COMMD4-201ENST00000267935 NUFIP2Q7Z417 695 aaKnown RBP12.64□□□□□ -0.39
COMMD4-201ENST00000267935 P2RY8Q86VZ1 359 aa12.64□□□□□ -0.39
COMMD4-201ENST00000267935 TDRPQ86YL5 185 aa12.64□□□□□ -0.39
COMMD4-201ENST00000267935 BANPQ8N9N5 519 aa12.64□□□□□ -0.39
COMMD4-201ENST00000267935 ATP6V1C2Q8NEY4 427 aa12.64□□□□□ -0.39
COMMD4-201ENST00000267935 FBXO27Q8NI29 283 aa12.64□□□□□ -0.39
COMMD4-201ENST00000267935 FBXO30Q8TB52 745 aa12.64□□□□□ -0.39
COMMD4-201ENST00000267935 ADAMTS15Q8TE58 950 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms