RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 RNPS1Q15287 305 aaKnown RBP10.96□□□□□ -0.65
TRAF4-202ENST00000262396 CTU2Q2VPK5 515 aaKnown RBP10.96□□□□□ -0.65
TRAF4-202ENST00000262396 PLPPR5Q32ZL2 321 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 KANK2Q63ZY3 851 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 CDC73Q6P1J9 531 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 PRSS57Q6UWY2 283 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 Q6ZSR9 355 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 MTERF4Q7Z6M4 381 aaKnown RBP10.96□□□□□ -0.65
TRAF4-202ENST00000262396 TRABD2AQ86V40 505 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 TOR1AIP2Q8NFQ8 470 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 OR2T11Q8NH01 316 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 OR5P2Q8WZ92 322 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 CPNE4Q96A23 557 aaPredicted RBP10.96□□□□□ -0.65
TRAF4-202ENST00000262396 FAM120BQ96EK7 910 aaKnown RBP10.96□□□□□ -0.65
TRAF4-202ENST00000262396 ZNF764Q96H86 408 aaPredicted RBP10.96□□□□□ -0.65
TRAF4-202ENST00000262396 APOPT1Q96IL0 206 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 HS3ST6Q96QI5 342 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 STACQ99469 402 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 C1orf50Q9BV19 199 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 HDHD5Q9BXW7 423 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 ACTRT3Q9BYD9 372 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 TXLNGYQ9BZA5 131 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 PIGUQ9H490 435 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 PCDHGB4Q9UN71 923 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 CARD8Q9Y2G2 431 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 CCL27Q9Y4X3 112 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 DNAJC15Q9Y5T4 150 aa10.96□□□□□ -0.65
TRAF4-202ENST00000262396 A0A0J9YW62 118 aa10.95□□□□□ -0.66
TRAF4-202ENST00000262396 A0A1W2PQD3 144 aa10.95□□□□□ -0.66
TRAF4-202ENST00000262396 ZNF195O14628 629 aa10.95□□□□□ -0.66
TRAF4-202ENST00000262396 SCAMP2O15127 329 aaKnown RBP10.95□□□□□ -0.66
TRAF4-202ENST00000262396 SIAH2O43255 324 aa10.95□□□□□ -0.66
TRAF4-202ENST00000262396 NPHS1O60500 1241 aa10.95□□□□□ -0.66
TRAF4-202ENST00000262396 SKAP2O75563 359 aaPredicted RBP10.95□□□□□ -0.66
TRAF4-202ENST00000262396 LYPLA1O75608 230 aaPredicted RBP10.95□□□□□ -0.66
TRAF4-202ENST00000262396 PRKD3O94806 890 aa10.95□□□□□ -0.66
TRAF4-202ENST00000262396 ALDH3A1P30838 453 aa10.95□□□□□ -0.66
TRAF4-202ENST00000262396 CCKARP32238 428 aa10.95□□□□□ -0.66
TRAF4-202ENST00000262396 PTH2RP49190 550 aa10.95□□□□□ -0.66
TRAF4-202ENST00000262396 P2RX1P51575 399 aa10.95□□□□□ -0.66
TRAF4-202ENST00000262396 FOXF1Q12946 379 aa10.95□□□□□ -0.66
TRAF4-202ENST00000262396 PGS1Q32NB8 556 aa10.95□□□□□ -0.66
TRAF4-202ENST00000262396 TMEM176BQ3YBM2 270 aaPredicted RBP10.95□□□□□ -0.66
TRAF4-202ENST00000262396 ARL13AQ5H913 290 aaPredicted RBP10.95□□□□□ -0.66
TRAF4-202ENST00000262396 DCST2Q5T1A1 773 aa10.95□□□□□ -0.66
TRAF4-202ENST00000262396 STAC2Q6ZMT1 411 aa10.95□□□□□ -0.66
TRAF4-202ENST00000262396 MED12LQ86YW9 2145 aa10.95□□□□□ -0.66
TRAF4-202ENST00000262396 EIF1ADQ8N9N8 165 aaKnown RBP10.95□□□□□ -0.66
TRAF4-202ENST00000262396 OR7A2PQ8NGA2 310 aa10.95□□□□□ -0.66
TRAF4-202ENST00000262396 FBXO27Q8NI29 283 aa10.95□□□□□ -0.66
TRAF4-202ENST00000262396 MOAP1Q96BY2 351 aa10.95□□□□□ -0.66
TRAF4-202ENST00000262396 TUBGCP3Q96CW5 907 aa10.95□□□□□ -0.66
TRAF4-202ENST00000262396 TRMT61AQ96FX7 289 aaKnown RBP10.95□□□□□ -0.66
TRAF4-202ENST00000262396 ESRP2Q9H6T0 727 aaKnown RBP10.95□□□□□ -0.66
TRAF4-202ENST00000262396 DUSP22Q9NRW4 184 aa10.95□□□□□ -0.66
TRAF4-202ENST00000262396 SERINC1Q9NRX5 453 aa10.95□□□□□ -0.66
TRAF4-202ENST00000262396 GPC6Q9Y625 555 aaPredicted RBP10.95□□□□□ -0.66
TRAF4-202ENST00000262396 ACANP16112 2415 aa10.95□□□□□ -0.66
TRAF4-202ENST00000262396 NAV3Q8IVL0 2385 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 NPIPA5A0A0B4J1W7 369 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 C7orf72A4D263 438 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 TRIM64A6NGJ6 449 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 TRIM64BA6NI03 449 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 TMEM233B4DJY2 109 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 NPIPA7E9PJI5 369 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 NPIPB8E9PQR5 432 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 ADAMDEC1O15204 470 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 SPAG7O75391 227 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 CNOT4O95628 575 aaKnown RBP10.94□□□□□ -0.66
TRAF4-202ENST00000262396 C6orf47O95873 294 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 CHRNGP07510 517 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 CD3EP07766 207 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 NPIPA8P0DM63 369 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 LAMP1P11279 417 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 IL11P20809 199 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 ELK4P28324 431 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 AGTR1P30556 359 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 SUMO3P55854 103 aaPredicted RBP10.94□□□□□ -0.66
TRAF4-202ENST00000262396 RPS4XP62701 263 aaKnown RBP10.94□□□□□ -0.66
TRAF4-202ENST00000262396 ZNF117Q03924 483 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 MAD2L1Q13257 205 aaPredicted RBP10.94□□□□□ -0.66
TRAF4-202ENST00000262396 PDE7AQ13946 482 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 CBFBQ13951 182 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 MLC1Q15049 377 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 CD226Q15762 336 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 STK11Q15831 433 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 TMEM44Q2T9K0 475 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 IL23RQ5VWK5 629 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 SH2D5Q6ZV89 423 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 FCRLAQ7L513 359 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 ZAR1Q86SH2 424 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 TUSC5Q8IXB3 177 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 ZNF619Q8N2I2 560 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 RIBC1Q8N443 379 aaPredicted RBP10.94□□□□□ -0.66
TRAF4-202ENST00000262396 OR5AK3PQ8NH89 298 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 FAM110BQ8TC76 370 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 ABHD3Q8WU67 409 aa10.94□□□□□ -0.66
TRAF4-202ENST00000262396 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.94□□□□□ -0.66
TRAF4-202ENST00000262396 AKAP1Q92667 903 aaKnown RBP eCLIP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms