RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 RNF6Q9Y252 685 aa17.43■□□□□ 0.38
TRIM47-201ENST00000254816 PCDHGB1Q9Y5G3 927 aa17.43■□□□□ 0.38
TRIM47-201ENST00000254816 RGS10O43665 173 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 CLPXO76031 633 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 ADAP00813 363 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 MMP11P24347 488 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 POU1F1P28069 291 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 PPICP45877 212 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 SPEM2Q0P670 501 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 TRAM2Q15035 370 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 DESI1Q6ICB0 168 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 RANBP3LQ86VV4 465 aaPredicted RBP17.42■□□□□ 0.38
TRIM47-201ENST00000254816 SLC15A4Q8N697 577 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 ADIPOR1Q96A54 375 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 GPA33Q99795 319 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 UCK2Q9BZX2 261 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 REV1Q9UBZ9 1251 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 SLC7A7Q9UM01 511 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 TEX51A0A1B0GUA7 166 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 C2orf92A0A1B0GVN3 265 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 M0R129 80 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 PFDN1O60925 122 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 CPNE3O75131 537 aaKnown RBP17.42■□□□□ 0.38
TRIM47-201ENST00000254816 CHMP24386 653 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 CXCR4P61073 352 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 PTGES3Q15185 160 aaKnown RBP17.42■□□□□ 0.38
TRIM47-201ENST00000254816 MOGQ16653 247 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 NDUFAF6Q330K2 333 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 PRICKLE2Q7Z3G6 844 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 ANKRD37Q7Z713 158 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 NAXDQ8IW45 347 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 OR1N1Q8NGS0 311 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 PMM1Q92871 262 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 SLC38A4Q969I6 547 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 BORCS5Q969J3 196 aa17.42■□□□□ 0.38
TRIM47-201ENST00000254816 NPIPB9F8W1W9 429 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 ADAM11O75078 769 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 ZNF806P0C7X5 589 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 DRD5P21918 477 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 GGT2P36268 569 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 IDH2P48735 452 aaKnown RBP17.41■□□□□ 0.38
TRIM47-201ENST00000254816 ATP12AP54707 1039 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 EBPQ15125 230 aaKnown RBP17.41■□□□□ 0.38
TRIM47-201ENST00000254816 DECR1Q16698 335 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 ZNF829Q3KNS6 432 aaPredicted RBP17.41■□□□□ 0.38
TRIM47-201ENST00000254816 NDNFQ8TB73 568 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 TMEM255BQ8WV15 326 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 LCORQ96JN0 433 aaPredicted RBP17.41■□□□□ 0.38
TRIM47-201ENST00000254816 EDEM2Q9BV94 578 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 RHBDL2Q9NX52 303 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 COPS7AQ9UBW8 275 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 CORINQ9Y5Q5 1042 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 ALOX12BO75342 701 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 CRISP1P54107 249 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 MC2RQ01718 297 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 OR1Q1Q15612 314 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 ZNF141Q15928 474 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 ZNF730Q6ZMV8 503 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 BPHLQ86WA6 291 aaPredicted RBP17.41■□□□□ 0.38
TRIM47-201ENST00000254816 RNF217Q8TC41 542 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 PLEKHA8Q96JA3 519 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 ART5Q96L15 291 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 SPSB2Q99619 263 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 POLR2J3Q9H1A7 115 aaKnown RBP17.41■□□□□ 0.38
TRIM47-201ENST00000254816 ARMC7Q9H6L4 198 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 AMBNQ9NP70 447 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 ACOT13Q9NPJ3 140 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 TBC1D23Q9NUY8 699 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 C14orf105Q9NVL8 296 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 DNAJB12Q9NXW2 375 aaKnown RBP17.41■□□□□ 0.38
TRIM47-201ENST00000254816 CFL2Q9Y281 166 aa17.41■□□□□ 0.38
TRIM47-201ENST00000254816 TTC36A6NLP5 189 aa17.4■□□□□ 0.38
TRIM47-201ENST00000254816 VSTM2BA6NLU5 285 aa17.4■□□□□ 0.38
TRIM47-201ENST00000254816 PIP5K1CO60331 668 aa17.4■□□□□ 0.38
TRIM47-201ENST00000254816 OR5F1O95221 314 aa17.4■□□□□ 0.38
TRIM47-201ENST00000254816 LCKP06239 509 aa17.4■□□□□ 0.38
TRIM47-201ENST00000254816 GUSBP08236 651 aa17.4■□□□□ 0.38
TRIM47-201ENST00000254816 IFNA8P32881 189 aa17.4■□□□□ 0.38
TRIM47-201ENST00000254816 RANBP1P43487 201 aa17.4■□□□□ 0.38
TRIM47-201ENST00000254816 NR0B1P51843 470 aaKnown RBP17.4■□□□□ 0.38
TRIM47-201ENST00000254816 EMP2P54851 167 aa17.4■□□□□ 0.38
TRIM47-201ENST00000254816 FGFBP1Q14512 234 aa17.4■□□□□ 0.38
TRIM47-201ENST00000254816 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.4■□□□□ 0.38
TRIM47-201ENST00000254816 GATSQ8NAP1 163 aa17.4■□□□□ 0.38
TRIM47-201ENST00000254816 NR4A3Q92570 626 aa17.4■□□□□ 0.38
TRIM47-201ENST00000254816 FRG2CA6NGY1 282 aa17.4■□□□□ 0.38
TRIM47-201ENST00000254816 GABARAPO95166 117 aa17.4■□□□□ 0.38
TRIM47-201ENST00000254816 OSMP13725 252 aa17.4■□□□□ 0.38
TRIM47-201ENST00000254816 ACVR2AP27037 513 aa17.4■□□□□ 0.38
TRIM47-201ENST00000254816 VBP1P61758 197 aa17.4■□□□□ 0.38
TRIM47-201ENST00000254816 C1orf94Q6P1W5 598 aa17.4■□□□□ 0.38
TRIM47-201ENST00000254816 C16orf87Q6PH81 154 aa17.4■□□□□ 0.38
TRIM47-201ENST00000254816 SUMF1Q8NBK3 374 aa17.4■□□□□ 0.38
TRIM47-201ENST00000254816 C8orf44Q96CB5 159 aa17.4■□□□□ 0.38
TRIM47-201ENST00000254816 YIPF6Q96EC8 236 aa17.4■□□□□ 0.38
TRIM47-201ENST00000254816 FAM46AQ96IP4 442 aaKnown RBP17.4■□□□□ 0.38
TRIM47-201ENST00000254816 WWTR1Q9GZV5 400 aa17.4■□□□□ 0.38
TRIM47-201ENST00000254816 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.4■□□□□ 0.38
TRIM47-201ENST00000254816 SLC39A1Q9NY26 324 aa17.4■□□□□ 0.38
TRIM47-201ENST00000254816 SELENONQ9NZV5 590 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms