RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 OR56A1Q8NGH5 318 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 PFN4Q8NHR9 129 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 ZNF431Q8TF32 576 aaPredicted RBP9.41□□□□□ -0.9
COPB1-201ENST00000249923 SPRYD4Q8WW59 207 aaPredicted RBP9.41□□□□□ -0.9
COPB1-201ENST00000249923 COL26A1Q96A83 441 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 TIMM29Q9BSF4 260 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 C1QTNF2Q9BXJ5 285 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 SLC7A7Q9UM01 511 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 EXOGQ9Y2C4 368 aaKnown RBP9.41□□□□□ -0.9
COPB1-201ENST00000249923 GSTK1Q9Y2Q3 226 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 FANCMQ8IYD8 2048 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 POM121BA6NF01 834 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 INMT-MINDY4F8WBC2 141 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 GABRPO00591 440 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 ADAM11O75078 769 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 ALX3O95076 343 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 POU2F2P09086 479 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 CSNK2A2P19784 350 aaPredicted RBP9.41□□□□□ -0.9
COPB1-201ENST00000249923 MAKP20794 623 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 GSTM3P21266 225 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 MAP2K3P46734 347 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 AGFG1P52594 562 aaKnown RBP9.41□□□□□ -0.9
COPB1-201ENST00000249923 EEF1A1P68104 462 aaKnown RBP9.41□□□□□ -0.9
COPB1-201ENST00000249923 RUNX3Q13761 415 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 SUZ12Q15022 739 aaKnown RBP9.41□□□□□ -0.9
COPB1-201ENST00000249923 PGGHGQ32M88 737 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 TRMT12Q53H54 448 aaKnown RBP9.41□□□□□ -0.9
COPB1-201ENST00000249923 PSRC1Q6PGN9 363 aaPredicted RBP9.41□□□□□ -0.9
COPB1-201ENST00000249923 TRILQ7L0X0 811 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 PAQR7Q86WK9 346 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 SFTPA2Q8IWL1 248 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 OR4E2Q8NGC2 313 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 SLC7A6Q92536 515 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 UPRTQ96BW1 309 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 SLC41A3Q96GZ6 507 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 CERS4Q9HA82 394 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 ATP13A2Q9NQ11 1180 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 GRIP1Q9Y3R0 1128 aa9.41□□□□□ -0.9
COPB1-201ENST00000249923 NPIPA5A0A0B4J1W7 369 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 TRDV1A0A1B0GX56 115 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 NPIPA7E9PJI5 369 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 NPIPA8P0DM63 369 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 PRKAR1BP31321 381 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 SEC13P55735 322 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 PUS10Q3MIT2 529 aaKnown RBP9.4□□□□□ -0.9
COPB1-201ENST00000249923 FAM27D1Q5T7N8 215 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 PRAMEF8Q5VWM4 474 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 PRAMEF7Q5VXH5 474 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 FBXO42Q6P3S6 717 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 THSD4Q6ZMP0 1018 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 GANCQ8TET4 914 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 ACOT11Q8WXI4 607 aaPredicted RBP9.4□□□□□ -0.9
COPB1-201ENST00000249923 UFD1Q92890 307 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 SAMD8Q96LT4 415 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 ISYNA1Q9NPH2 558 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 NTMQ9P121 344 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 ZNF223Q9UK11 482 aaPredicted RBP9.4□□□□□ -0.9
COPB1-201ENST00000249923 ZNF443Q9Y2A4 671 aaPredicted RBP9.4□□□□□ -0.9
COPB1-201ENST00000249923 ALG5Q9Y673 324 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 A0A1W2PQU0 124 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 CENPBD1B2RD01 187 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 E9PI62 339 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 K7EQS6 105 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 PEX12O00623 359 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 LANCL1O43813 399 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 RFPL3O75679 317 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 GKN3PP0CG01 181 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 P2RX3P56373 397 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 SIM1P81133 766 aaPredicted RBP9.4□□□□□ -0.9
COPB1-201ENST00000249923 ID2Q02363 134 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 RUNX2Q13950 521 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 DECR1Q16698 335 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 HSDL2Q6YN16 418 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 CPOQ8IVL8 374 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 LINC00471Q8N535 108 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 TMEM99Q8N816 258 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 BOLLQ8N9W6 283 aaKnown RBP9.4□□□□□ -0.9
COPB1-201ENST00000249923 TTLQ8NG68 377 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 SPATA5L1Q9BVQ7 753 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 ACTRT3Q9BYD9 372 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 UBQLN3Q9H347 655 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 MRPL39Q9NYK5 338 aaKnown RBP9.4□□□□□ -0.9
COPB1-201ENST00000249923 RDH8Q9NYR8 311 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 FBXL4Q9UKA2 621 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 ENTPD4Q9Y227 616 aa9.4□□□□□ -0.9
COPB1-201ENST00000249923 ERVH48-1M5A8F1 160 aa9.4□□□□□ -0.91
COPB1-201ENST00000249923 KIR2DL1P43626 348 aaPredicted RBP9.4□□□□□ -0.91
COPB1-201ENST00000249923 PRR5P85299 388 aa9.4□□□□□ -0.91
COPB1-201ENST00000249923 TFF2Q03403 129 aa9.4□□□□□ -0.91
COPB1-201ENST00000249923 FHL5Q5TD97 284 aa9.4□□□□□ -0.91
COPB1-201ENST00000249923 ANKRD54Q6NXT1 300 aa9.4□□□□□ -0.91
COPB1-201ENST00000249923 ZNF322Q6U7Q0 402 aaPredicted RBP9.4□□□□□ -0.91
COPB1-201ENST00000249923 MBOAT2Q6ZWT7 520 aa9.4□□□□□ -0.91
COPB1-201ENST00000249923 ZAR1Q86SH2 424 aa9.4□□□□□ -0.91
COPB1-201ENST00000249923 KLBQ86Z14 1044 aa9.4□□□□□ -0.91
COPB1-201ENST00000249923 OR2L13Q8N349 312 aa9.4□□□□□ -0.91
COPB1-201ENST00000249923 RFLNBQ8N5W9 214 aa9.4□□□□□ -0.91
COPB1-201ENST00000249923 DNAJA4Q8WW22 397 aaPredicted RBP9.4□□□□□ -0.91
COPB1-201ENST00000249923 FAM131CQ96AQ9 280 aa9.4□□□□□ -0.91
COPB1-201ENST00000249923 SCARF2Q96GP6 870 aaPredicted RBP9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms