RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 BPIFA2Q96DR5 249 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 C7orf34Q96L11 122 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 ZNF300Q96RE9 604 aaPredicted RBP17.79■□□□□ 0.44
SMPD3-201ENST00000219334 M0R233 179 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 NPR2P20594 1047 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 DCTP40126 519 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 FOXA1P55317 472 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 SHHQ15465 462 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 DEFB123Q8N688 67 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 SDR9C7Q8NEX9 313 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 OR9Q2Q8NGE9 314 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 PRRC1Q96M27 445 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 PADI1Q9ULC6 663 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 RGPD8O14715 1765 aaPredicted RBP17.79■□□□□ 0.44
SMPD3-201ENST00000219334 GABARAPL2P60520 117 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 COL28A1Q2UY09 1125 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 OR1J4Q8NGS1 313 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 HDAC8Q9BY41 377 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 NXF5Q9H1B4 397 aaKnown RBP17.78■□□□□ 0.44
SMPD3-201ENST00000219334 PLEKHA3Q9HB20 300 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 TRAV18A0A075B6X5 111 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 B8ZZF3 427 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 AMY2AP04746 511 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 ALG8Q9BVK2 526 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 OBP2BQ9NPH6 170 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 FGF21Q9NSA1 209 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 MYOGP15173 224 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 TP53I3Q53FA7 332 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 ALKAL1Q6UXT8 129 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 ENDOVQ8N8Q3 282 aaKnown RBP17.78■□□□□ 0.44
SMPD3-201ENST00000219334 MARCH5Q9NX47 278 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 LOC105369274A0A096LPK9 316 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 DCDC2BA2VCK2 349 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 PBX2P40425 430 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 PAGE3Q5JUK9 113 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 OR4N4Q8N0Y3 316 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 GLYATL2Q8WU03 294 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 SENP5Q96HI0 755 aaPredicted RBP17.78■□□□□ 0.44
SMPD3-201ENST00000219334 OR7D2Q96RA2 312 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 KLHL9Q9P2J3 617 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 HOXA9P31269 272 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 FNTBP49356 437 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 HLCSP50747 726 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 ZNF417Q8TAU3 575 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 PLEKHJ1Q9NW61 149 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 EMC9Q9Y3B6 208 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 ZNF337Q9Y3M9 751 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 CSNK1G3Q9Y6M4 447 aa17.78■□□□□ 0.44
SMPD3-201ENST00000219334 FAM230AA0A1W2PPH8 454 aa17.77■□□□□ 0.44
SMPD3-201ENST00000219334 SLC1A7O00341 560 aa17.77■□□□□ 0.44
SMPD3-201ENST00000219334 LSM1O15116 133 aaKnown RBP17.77■□□□□ 0.44
SMPD3-201ENST00000219334 WDPCPO95876 746 aa17.77■□□□□ 0.44
SMPD3-201ENST00000219334 CD27P26842 260 aa17.77■□□□□ 0.44
SMPD3-201ENST00000219334 ZNF423Q2M1K9 1284 aa17.77■□□□□ 0.44
SMPD3-201ENST00000219334 TMEM244Q5VVB8 128 aa17.77■□□□□ 0.44
SMPD3-201ENST00000219334 ZBTB8BQ8NAP8 495 aaPredicted RBP17.77■□□□□ 0.44
SMPD3-201ENST00000219334 PHF7Q9BWX1 381 aaPredicted RBP17.77■□□□□ 0.44
SMPD3-201ENST00000219334 ZBTB42B2RXF5 422 aa17.77■□□□□ 0.44
SMPD3-201ENST00000219334 GPR39O43194 453 aa17.77■□□□□ 0.44
SMPD3-201ENST00000219334 CDK2P24941 298 aa17.77■□□□□ 0.44
SMPD3-201ENST00000219334 CTHP32929 405 aa17.77■□□□□ 0.44
SMPD3-201ENST00000219334 PTGER1P34995 402 aa17.77■□□□□ 0.44
SMPD3-201ENST00000219334 ZNF81P51508 661 aa17.77■□□□□ 0.44
SMPD3-201ENST00000219334 GSG1LQ6UXU4 331 aa17.77■□□□□ 0.44
SMPD3-201ENST00000219334 SERPINA11Q86U17 422 aa17.77■□□□□ 0.44
SMPD3-201ENST00000219334 CHFRQ96EP1 664 aa17.77■□□□□ 0.44
SMPD3-201ENST00000219334 SMIM14Q96QK8 99 aa17.77■□□□□ 0.44
SMPD3-201ENST00000219334 WDR83Q9BRX9 315 aaKnown RBP17.77■□□□□ 0.44
SMPD3-201ENST00000219334 C4BP0C0L5 1744 aa17.77■□□□□ 0.44
SMPD3-201ENST00000219334 MAT1AQ00266 395 aaKnown RBP17.77■□□□□ 0.43
SMPD3-201ENST00000219334 CCNJQ5T5M9 372 aa17.77■□□□□ 0.43
SMPD3-201ENST00000219334 HES5Q5TA89 166 aa17.77■□□□□ 0.43
SMPD3-201ENST00000219334 TMEM178AQ8NBL3 297 aa17.77■□□□□ 0.43
SMPD3-201ENST00000219334 OR13J1Q8NGT2 312 aa17.77■□□□□ 0.43
SMPD3-201ENST00000219334 B3GNT2Q9NY97 397 aa17.77■□□□□ 0.43
SMPD3-201ENST00000219334 ADAM29Q9UKF5 820 aa17.77■□□□□ 0.43
SMPD3-201ENST00000219334 ARFGEF2Q9Y6D5 1785 aa17.77■□□□□ 0.43
SMPD3-201ENST00000219334 RAD1O60671 282 aa17.77■□□□□ 0.43
SMPD3-201ENST00000219334 MITFO75030 526 aaPredicted RBP17.77■□□□□ 0.43
SMPD3-201ENST00000219334 SLC43A1O75387 559 aa17.77■□□□□ 0.43
SMPD3-201ENST00000219334 MKXQ8IYA7 352 aa17.77■□□□□ 0.43
SMPD3-201ENST00000219334 BEST3Q8N1M1 668 aa17.77■□□□□ 0.43
SMPD3-201ENST00000219334 ZFPM2Q8WW38 1151 aa17.77■□□□□ 0.43
SMPD3-201ENST00000219334 ACOT11Q8WXI4 607 aaPredicted RBP17.77■□□□□ 0.43
SMPD3-201ENST00000219334 GON4LQ3T8J9 2241 aa17.76■□□□□ 0.43
SMPD3-201ENST00000219334 DLG5Q8TDM6 1919 aa17.76■□□□□ 0.43
SMPD3-201ENST00000219334 MYH11P35749 1972 aa17.76■□□□□ 0.43
SMPD3-201ENST00000219334 SLC16A7O60669 478 aa17.76■□□□□ 0.43
SMPD3-201ENST00000219334 EGFP01133 1207 aa17.76■□□□□ 0.43
SMPD3-201ENST00000219334 SGSHP51688 502 aa17.76■□□□□ 0.43
SMPD3-201ENST00000219334 ADARB1P78563 741 aaKnown RBP17.76■□□□□ 0.43
SMPD3-201ENST00000219334 WDR53Q7Z5U6 358 aaPredicted RBP17.76■□□□□ 0.43
SMPD3-201ENST00000219334 UCN3Q969E3 161 aa17.76■□□□□ 0.43
SMPD3-201ENST00000219334 PDLIM5Q96HC4 596 aaKnown RBP17.76■□□□□ 0.43
SMPD3-201ENST00000219334 NUP188Q5SRE5 1749 aa17.76■□□□□ 0.43
SMPD3-201ENST00000219334 PRDX3P30048 256 aaKnown RBP17.76■□□□□ 0.43
SMPD3-201ENST00000219334 IST1P53990 364 aa17.76■□□□□ 0.43
SMPD3-201ENST00000219334 POU3F1Q03052 451 aaPredicted RBP17.76■□□□□ 0.43
SMPD3-201ENST00000219334 GPR139Q6DWJ6 353 aa17.76■□□□□ 0.43
SMPD3-201ENST00000219334 ARFGAP1Q8N6T3 406 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms