RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 KCNJ5P48544 419 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 TRAP1Q12931 704 aaKnown RBP24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 FLOT2Q14254 428 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 SLC6A19Q695T7 634 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 LCN8Q6JVE9 175 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 CBLN3Q6UW01 205 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 PNPLA5Q7Z6Z6 429 aaPredicted RBP24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 MISPQ8IVT2 679 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 CMIPQ8IY22 773 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 RASSF5Q8WWW0 418 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 SLC39A7Q92504 469 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 NTNG2Q96CW9 530 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 TMEM41AQ96HV5 264 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 FRMD6Q96NE9 622 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 ARMC7Q9H6L4 198 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 DCAF13Q9NV06 445 aaKnown RBP24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 DNAJB12Q9NXW2 375 aaKnown RBP24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 SLC13A4Q9UKG4 626 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 EPG5Q9HCE0 2579 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 B4DXG7 233 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 SUV39H1O43463 412 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 FRS3O43559 492 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 EPPINO95925 133 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 ADH7P40394 386 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 CCR4P51679 360 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 EIPR1Q53HC9 387 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 PCSK4Q6UW60 755 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 CBLL1Q75N03 491 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 WDSUB1Q8N9V3 476 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 LRGUKQ96M69 825 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 SLC25A18Q9H1K4 315 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 MED11Q9P086 117 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 RPS6KA6Q9UK32 745 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 PCDHGB6Q9Y5F9 930 aa24.86■■□□□ 1.57
CHMP4B-201ENST00000217402 TMEM229AB2RXF0 380 aa24.85■■□□□ 1.57
CHMP4B-201ENST00000217402 SNPHO15079 494 aa24.85■■□□□ 1.57
CHMP4B-201ENST00000217402 CIB2O75838 187 aa24.85■■□□□ 1.57
CHMP4B-201ENST00000217402 FESP07332 822 aa24.85■■□□□ 1.57
CHMP4B-201ENST00000217402 ERFP50548 548 aa24.85■■□□□ 1.57
CHMP4B-201ENST00000217402 SKP2Q13309 424 aa24.85■■□□□ 1.57
CHMP4B-201ENST00000217402 PLEKHN1Q494U1 663 aaPredicted RBP24.85■■□□□ 1.57
CHMP4B-201ENST00000217402 C1orf146Q5VVC0 180 aa24.85■■□□□ 1.57
CHMP4B-201ENST00000217402 ZNF771Q7L3S4 317 aaPredicted RBP24.85■■□□□ 1.57
CHMP4B-201ENST00000217402 VTCN1Q7Z7D3 282 aa24.85■■□□□ 1.57
CHMP4B-201ENST00000217402 BHLHE22Q8NFJ8 381 aaPredicted RBP24.85■■□□□ 1.57
CHMP4B-201ENST00000217402 OR1J4Q8NGS1 313 aa24.85■■□□□ 1.57
CHMP4B-201ENST00000217402 RNF145Q96MT1 663 aa24.85■■□□□ 1.57
CHMP4B-201ENST00000217402 BAG5Q9UL15 447 aa24.85■■□□□ 1.57
CHMP4B-201ENST00000217402 BOKQ9UMX3 212 aaPredicted RBP24.85■■□□□ 1.57
CHMP4B-201ENST00000217402 LHX6Q9UPM6 363 aa24.85■■□□□ 1.57
CHMP4B-201ENST00000217402 LRRC3CA6NJW4 275 aa24.84■■□□□ 1.57
CHMP4B-201ENST00000217402 NQO1P15559 274 aaKnown RBP24.84■■□□□ 1.57
CHMP4B-201ENST00000217402 TNFRSF1BP20333 461 aa24.84■■□□□ 1.57
CHMP4B-201ENST00000217402 ENDOUP21128 410 aaKnown RBP24.84■■□□□ 1.57
CHMP4B-201ENST00000217402 SELENOWP63302 87 aa24.84■■□□□ 1.57
CHMP4B-201ENST00000217402 PMP22Q01453 160 aa24.84■■□□□ 1.57
CHMP4B-201ENST00000217402 FOXO1Q12778 655 aa24.84■■□□□ 1.57
CHMP4B-201ENST00000217402 COLEC12Q5KU26 742 aa24.84■■□□□ 1.57
CHMP4B-201ENST00000217402 TIGD3Q6B0B8 471 aa24.84■■□□□ 1.57
CHMP4B-201ENST00000217402 FAM86B1Q8N7N1 296 aa24.84■■□□□ 1.57
CHMP4B-201ENST00000217402 FAM71CQ8NEG0 241 aa24.84■■□□□ 1.57
CHMP4B-201ENST00000217402 OR4K17Q8NGC6 315 aa24.84■■□□□ 1.57
CHMP4B-201ENST00000217402 LZICQ8WZA0 190 aa24.84■■□□□ 1.57
CHMP4B-201ENST00000217402 PROX1Q92786 737 aa24.84■■□□□ 1.57
CHMP4B-201ENST00000217402 HSH2DQ96JZ2 352 aa24.84■■□□□ 1.57
CHMP4B-201ENST00000217402 GNRHR2Q96P88 292 aa24.84■■□□□ 1.57
CHMP4B-201ENST00000217402 RAB3IPQ96QF0 476 aaPredicted RBP24.84■■□□□ 1.57
CHMP4B-201ENST00000217402 TRIM15Q9C019 465 aa24.84■■□□□ 1.57
CHMP4B-201ENST00000217402 KLHL28Q9NXS3 571 aa24.84■■□□□ 1.57
CHMP4B-201ENST00000217402 FBXL2Q9UKC9 423 aa24.84■■□□□ 1.57
CHMP4B-201ENST00000217402 SAMD4AQ9UPU9 718 aaKnown RBP24.84■■□□□ 1.57
CHMP4B-201ENST00000217402 SH3GLB1Q9Y371 365 aa24.84■■□□□ 1.57
CHMP4B-201ENST00000217402 NINQ8N4C6 2090 aa24.83■■□□□ 1.57
CHMP4B-201ENST00000217402 GKN3PP0CG01 181 aa24.83■■□□□ 1.57
CHMP4B-201ENST00000217402 PLGLB1Q02325 96 aa24.83■■□□□ 1.57
CHMP4B-201ENST00000217402 ELOAQ14241 798 aaKnown RBP24.83■■□□□ 1.57
CHMP4B-201ENST00000217402 ENPP6Q6UWR7 440 aa24.83■■□□□ 1.57
CHMP4B-201ENST00000217402 PLCZ1Q86YW0 608 aa24.83■■□□□ 1.57
CHMP4B-201ENST00000217402 EID3Q8N140 333 aa24.83■■□□□ 1.57
CHMP4B-201ENST00000217402 B4GALNT2Q8NHY0 566 aa24.83■■□□□ 1.57
CHMP4B-201ENST00000217402 KLHDC3Q9BQ90 382 aa24.83■■□□□ 1.57
CHMP4B-201ENST00000217402 DSN1Q9H410 356 aa24.83■■□□□ 1.57
CHMP4B-201ENST00000217402 ZFP64Q9NPA5 681 aa24.83■■□□□ 1.57
CHMP4B-201ENST00000217402 M0R3H8 397 aa24.83■■□□□ 1.56
CHMP4B-201ENST00000217402 PRKD3O94806 890 aa24.83■■□□□ 1.56
CHMP4B-201ENST00000217402 SFTPCP11686 197 aa24.83■■□□□ 1.56
CHMP4B-201ENST00000217402 FKBP9P1Q75LS8 142 aa24.83■■□□□ 1.56
CHMP4B-201ENST00000217402 FAM98AQ8NCA5 519 aaKnown RBP24.83■■□□□ 1.56
CHMP4B-201ENST00000217402 VANGL1Q8TAA9 524 aaPredicted RBP24.83■■□□□ 1.56
CHMP4B-201ENST00000217402 PNPLA2Q96AD5 504 aa24.83■■□□□ 1.56
CHMP4B-201ENST00000217402 WFDC6Q9BQY6 131 aa24.83■■□□□ 1.56
CHMP4B-201ENST00000217402 LAT2Q9GZY6 243 aa24.83■■□□□ 1.56
CHMP4B-201ENST00000217402 ICAM5Q9UMF0 924 aa24.83■■□□□ 1.56
CHMP4B-201ENST00000217402 NBEAQ8NFP9 2946 aa24.82■■□□□ 1.56
CHMP4B-201ENST00000217402 SYT5O00445 386 aa24.82■■□□□ 1.56
CHMP4B-201ENST00000217402 EIF4E2O60573 245 aaKnown RBP24.82■■□□□ 1.56
CHMP4B-201ENST00000217402 NUDT14O95848 222 aa24.82■■□□□ 1.56
CHMP4B-201ENST00000217402 LGI1O95970 557 aa24.82■■□□□ 1.56
CHMP4B-201ENST00000217402 ELAVL4P26378 380 aaKnown RBP24.82■■□□□ 1.56
CHMP4B-201ENST00000217402 RYKP34925 604 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms