RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 SDE2Q6IQ49 451 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 SFXN4Q6P4A7 337 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 B3GLCTQ6Y288 498 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 TMPRSS11FQ6ZWK6 438 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 ZNF619Q8N2I2 560 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 OR10H4Q8NGA5 316 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 ART5Q96L15 291 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 HYLS1Q96M11 299 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 GFM1Q96RP9 751 aaKnown RBP12.36□□□□□ -0.43
SRP54-201ENST00000216774 SERINC2Q96SA4 455 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 PIGUQ9H490 435 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 MED20Q9H944 212 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 GALNT9Q9HCQ5 603 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 SATB2Q9UPW6 733 aa12.36□□□□□ -0.43
SRP54-201ENST00000216774 MKI67P46013 3256 aaKnown RBP12.36□□□□□ -0.43
SRP54-201ENST00000216774 NOTOA8MTQ0 251 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 PRR23D1E9PI22 279 aaPredicted RBP12.35□□□□□ -0.43
SRP54-201ENST00000216774 ERVH48-1M5A8F1 160 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 TNFRSF10AO00220 468 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 STX11O75558 287 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 LYPD3O95274 346 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 EIF4EP06730 217 aaKnown RBP12.35□□□□□ -0.43
SRP54-201ENST00000216774 SLC35G6P0C7Q6 338 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 PRR23D2P0DMB1 279 aaPredicted RBP12.35□□□□□ -0.43
SRP54-201ENST00000216774 IFI30P13284 250 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 SHC1P29353 583 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 TLX1P31314 330 aaPredicted RBP12.35□□□□□ -0.43
SRP54-201ENST00000216774 HTR2BP41595 481 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 VEGFBP49765 207 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 C19orf57Q0VDD7 668 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 ENPP2Q13822 863 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 OR1Q1Q15612 314 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 BTBD16Q32M84 506 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 EXOSC6Q5RKV6 272 aaKnown RBP12.35□□□□□ -0.43
SRP54-201ENST00000216774 VITQ6UXI7 678 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 WDR88Q6ZMY6 472 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 USP53Q70EK8 1073 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 PXKQ7Z7A4 578 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 CDK20Q8IZL9 346 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 CADM2Q8N3J6 435 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 C12orf76Q8N812 135 aaPredicted RBP12.35□□□□□ -0.43
SRP54-201ENST00000216774 SAMD12Q8N8I0 201 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 LCN9Q8WX39 176 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 FGF13Q92913 245 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 SCARF2Q96GP6 870 aaPredicted RBP12.35□□□□□ -0.43
SRP54-201ENST00000216774 PAWRQ96IZ0 340 aaKnown RBP12.35□□□□□ -0.43
SRP54-201ENST00000216774 HCAR1Q9BXC0 346 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 ABCG5Q9H222 651 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 PPIL3Q9H2H8 161 aaKnown RBP12.35□□□□□ -0.43
SRP54-201ENST00000216774 CLDND1Q9NY35 253 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 MRPL39Q9NYK5 338 aaKnown RBP12.35□□□□□ -0.43
SRP54-201ENST00000216774 MOSPD1Q9UJG1 213 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 C19orf53Q9UNZ5 99 aaPredicted RBP12.35□□□□□ -0.43
SRP54-201ENST00000216774 RASD1Q9Y272 281 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 CENPVL1A0A0U1RR11 272 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 ZC3H12DA2A288 527 aaKnown RBP12.35□□□□□ -0.43
SRP54-201ENST00000216774 C5orf67F2Z3F1 127 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 SC5DO75845 299 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 PAHP00439 452 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 PRG2P13727 222 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 AHCYP23526 432 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 NDUFS1P28331 727 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 EVI2BP34910 448 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 GJA4P35212 333 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 CLDN2P57739 230 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 GPLD1P80108 840 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 FOXK2Q01167 660 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 SUZ12Q15022 739 aaKnown RBP12.35□□□□□ -0.43
SRP54-201ENST00000216774 ANGPT1Q15389 498 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 GPR68Q15743 365 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 CCDC85BQ15834 202 aaPredicted RBP12.35□□□□□ -0.43
SRP54-201ENST00000216774 LAMTOR1Q6IAA8 161 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 PYHIN1Q6K0P9 492 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 ARL9Q6T311 187 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 GHDCQ8N2G8 530 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 TEX19Q8NA77 164 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 PFN4Q8NHR9 129 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 SLC2A12Q8TD20 617 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 PMM1Q92871 262 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 PTP4A1Q93096 173 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 TBX5Q99593 518 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 TEAD3Q99594 435 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 C1QTNF7Q9BXJ2 289 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 TRPV4Q9HBA0 871 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 C20orf141Q9NUB4 165 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 NCKAP1Q9Y2A7 1128 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 SLC35A3Q9Y2D2 325 aa12.35□□□□□ -0.43
SRP54-201ENST00000216774 CDHR4A6H8M9 788 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 RIIAD1A6NNX1 92 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 LANCL1O43813 399 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 SMIM10L1P0DMW3 83 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 TFPIP10646 304 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 CPMP14384 443 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 IGFALSP35858 605 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 RUNX3Q13761 415 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 MAPK14Q16539 360 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 CCDC58Q4VC31 144 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 KLHL12Q53G59 568 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 C2orf27AQ580R0 203 aa12.34□□□□□ -0.43
SRP54-201ENST00000216774 DCST2Q5T1A1 773 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms