RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 TMPRSS11FQ6ZWK6 438 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 BCORP1Q8N888 145 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 C7orf57Q8NEG2 295 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 PTPMT1Q8WUK0 201 aaPredicted RBP27.41■■□□□ 1.98
PABPN1-201ENST00000216727 FGF20Q9NP95 211 aaPredicted RBP27.41■■□□□ 1.98
PABPN1-201ENST00000216727 GPR52Q9Y2T5 361 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 PMF1-BGLAPU3KQ54 211 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 SDK1Q7Z5N4 2213 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 CABIN1Q9Y6J0 2220 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 CACNA1EQ15878 2313 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 IGKV3D-11A0A0A0MRZ8 115 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 CSO75390 466 aaKnown RBP27.41■■□□□ 1.98
PABPN1-201ENST00000216727 IFI30P13284 250 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 FOLR1P15328 257 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 CTBP2P56545 445 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 TIMM50Q3ZCQ8 353 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 USP43Q70EL4 1123 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 ZNF550Q7Z398 422 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 ATCAYQ86WG3 371 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 PFN4Q8NHR9 129 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 SENP5Q96HI0 755 aaPredicted RBP27.41■■□□□ 1.98
PABPN1-201ENST00000216727 OPALINQ96PE5 141 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 NDC1Q9BTX1 674 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 DPH1Q9BZG8 443 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 SLIRPQ9GZT3 109 aaKnown RBP27.41■■□□□ 1.98
PABPN1-201ENST00000216727 HHATLQ9HCP6 504 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 C20orf141Q9NUB4 165 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 FLRT3Q9NZU0 649 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 MED31Q9Y3C7 131 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 ASXL3Q9C0F0 2248 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 ARID1BQ8NFD5 2236 aaPredicted RBP27.4■■□□□ 1.98
PABPN1-201ENST00000216727 MAKP20794 623 aa27.4■■□□□ 1.98
PABPN1-201ENST00000216727 TGFBR1P36897 503 aa27.4■■□□□ 1.98
PABPN1-201ENST00000216727 TSTQ16762 297 aaKnown RBP27.4■■□□□ 1.98
PABPN1-201ENST00000216727 C3orf38Q5JPI3 329 aa27.4■■□□□ 1.98
PABPN1-201ENST00000216727 YOD1Q5VVQ6 348 aaPredicted RBP27.4■■□□□ 1.98
PABPN1-201ENST00000216727 ADCK1Q86TW2 530 aa27.4■■□□□ 1.98
PABPN1-201ENST00000216727 CDK20Q8IZL9 346 aa27.4■■□□□ 1.98
PABPN1-201ENST00000216727 SH3YL1Q96HL8 342 aaPredicted RBP27.4■■□□□ 1.98
PABPN1-201ENST00000216727 SAMD8Q96LT4 415 aa27.4■■□□□ 1.98
PABPN1-201ENST00000216727 ZNF426Q9BUY5 554 aa27.4■■□□□ 1.98
PABPN1-201ENST00000216727 YIPF2Q9BWQ6 316 aa27.4■■□□□ 1.98
PABPN1-201ENST00000216727 ZBTB20Q9HC78 741 aaPredicted RBP27.4■■□□□ 1.98
PABPN1-201ENST00000216727 PALMDQ9NP74 551 aa27.4■■□□□ 1.98
PABPN1-201ENST00000216727 DHCR7Q9UBM7 475 aaKnown RBP27.4■■□□□ 1.98
PABPN1-201ENST00000216727 A0A1B0GWA3 101 aa27.4■■□□□ 1.98
PABPN1-201ENST00000216727 ARHGAP33O14559 1287 aa27.4■■□□□ 1.98
PABPN1-201ENST00000216727 MYF5P13349 255 aa27.4■■□□□ 1.98
PABPN1-201ENST00000216727 DOC2BQ14184 412 aa27.4■■□□□ 1.98
PABPN1-201ENST00000216727 AADACL4Q5VUY2 407 aa27.4■■□□□ 1.98
PABPN1-201ENST00000216727 RPL13AP3Q6NVV1 102 aa27.4■■□□□ 1.98
PABPN1-201ENST00000216727 C11orf74Q86VG3 221 aa27.4■■□□□ 1.98
PABPN1-201ENST00000216727 CACTIN-AS1Q8N1I8 211 aa27.4■■□□□ 1.98
PABPN1-201ENST00000216727 RNF217Q8TC41 542 aa27.4■■□□□ 1.98
PABPN1-201ENST00000216727 ZDHHC19Q8WVZ1 309 aaPredicted RBP27.4■■□□□ 1.98
PABPN1-201ENST00000216727 RFKQ969G6 155 aa27.4■■□□□ 1.98
PABPN1-201ENST00000216727 PLEKHA8Q96JA3 519 aa27.4■■□□□ 1.98
PABPN1-201ENST00000216727 OR51E2Q9H255 320 aa27.4■■□□□ 1.98
PABPN1-201ENST00000216727 OR52D1Q9H346 318 aa27.4■■□□□ 1.98
PABPN1-201ENST00000216727 UBQLN3Q9H347 655 aa27.4■■□□□ 1.98
PABPN1-201ENST00000216727 SERTAD3Q9UJW9 196 aa27.4■■□□□ 1.98
PABPN1-201ENST00000216727 ADAM11O75078 769 aa27.39■■□□□ 1.98
PABPN1-201ENST00000216727 CKMT1AP12532 417 aa27.39■■□□□ 1.98
PABPN1-201ENST00000216727 OPRL1P41146 370 aa27.39■■□□□ 1.98
PABPN1-201ENST00000216727 RBM34P42696 430 aaKnown RBP27.39■■□□□ 1.98
PABPN1-201ENST00000216727 MTNR1AP48039 350 aa27.39■■□□□ 1.98
PABPN1-201ENST00000216727 DHPSP49366 369 aaPredicted RBP27.39■■□□□ 1.98
PABPN1-201ENST00000216727 SLC15A4Q8N697 577 aa27.39■■□□□ 1.98
PABPN1-201ENST00000216727 ZSCAN1Q8NBB4 408 aa27.39■■□□□ 1.98
PABPN1-201ENST00000216727 BPIFA2Q96DR5 249 aa27.39■■□□□ 1.98
PABPN1-201ENST00000216727 RNFT2Q96EX2 444 aa27.39■■□□□ 1.98
PABPN1-201ENST00000216727 DACH2Q96NX9 599 aa27.39■■□□□ 1.98
PABPN1-201ENST00000216727 ZNF768Q9H5H4 540 aaKnown RBP27.39■■□□□ 1.98
PABPN1-201ENST00000216727 LAMA1P25391 3075 aa27.39■■□□□ 1.97
PABPN1-201ENST00000216727 ZGLP1P0C6A0 271 aa27.38■■□□□ 1.97
PABPN1-201ENST00000216727 PTNP21246 168 aa27.38■■□□□ 1.97
PABPN1-201ENST00000216727 KHDRBS1Q07666 443 aaKnown RBP eCLIP27.38■■□□□ 1.97
PABPN1-201ENST00000216727 C1DQ13901 141 aaKnown RBP27.38■■□□□ 1.97
PABPN1-201ENST00000216727 SSX1Q16384 188 aa27.38■■□□□ 1.97
PABPN1-201ENST00000216727 NNATQ16517 81 aa27.38■■□□□ 1.97
PABPN1-201ENST00000216727 KBTBD8Q8NFY9 601 aa27.38■■□□□ 1.97
PABPN1-201ENST00000216727 OIT3Q8WWZ8 545 aa27.38■■□□□ 1.97
PABPN1-201ENST00000216727 DUSP23Q9BVJ7 150 aa27.38■■□□□ 1.97
PABPN1-201ENST00000216727 ATP13A2Q9NQ11 1180 aa27.38■■□□□ 1.97
PABPN1-201ENST00000216727 FBXO8Q9NRD0 319 aa27.38■■□□□ 1.97
PABPN1-201ENST00000216727 UNC13CQ8NB66 2214 aa27.38■■□□□ 1.97
PABPN1-201ENST00000216727 MYL12BO14950 172 aa27.38■■□□□ 1.97
PABPN1-201ENST00000216727 DSCR3O14972 297 aa27.38■■□□□ 1.97
PABPN1-201ENST00000216727 CH25HO95992 272 aa27.38■■□□□ 1.97
PABPN1-201ENST00000216727 PNLIPP16233 465 aa27.38■■□□□ 1.97
PABPN1-201ENST00000216727 EPHA8P29322 1005 aaPredicted RBP27.38■■□□□ 1.97
PABPN1-201ENST00000216727 SLC37A1P57057 533 aa27.38■■□□□ 1.97
PABPN1-201ENST00000216727 FANK1Q8TC84 345 aa27.38■■□□□ 1.97
PABPN1-201ENST00000216727 GRHL3Q8TE85 626 aa27.38■■□□□ 1.97
PABPN1-201ENST00000216727 SLC46A1Q96NT5 459 aa27.38■■□□□ 1.97
PABPN1-201ENST00000216727 ZNF304Q9HCX3 659 aa27.38■■□□□ 1.97
PABPN1-201ENST00000216727 PNO1Q9NRX1 252 aaKnown RBP27.38■■□□□ 1.97
PABPN1-201ENST00000216727 TOX3O15405 576 aaPredicted RBP27.37■■□□□ 1.97
PABPN1-201ENST00000216727 DYRK3O43781 588 aa27.37■■□□□ 1.97
PABPN1-201ENST00000216727 RCBTB2O95199 551 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms