RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 TMEM237Q96Q45 408 aa2.39□□□□□ -2.03
ATM-230ENST00000640388 RASL10BQ96S79 203 aa2.39□□□□□ -2.03
ATM-230ENST00000640388 APOL2Q9BQE5 337 aa2.39□□□□□ -2.03
ATM-230ENST00000640388 XPO4Q9C0E2 1151 aaKnown RBP2.39□□□□□ -2.03
ATM-230ENST00000640388 C1orf21Q9H246 121 aa2.39□□□□□ -2.03
ATM-230ENST00000640388 FAM212BQ9NTI7 297 aaPredicted RBP2.39□□□□□ -2.03
ATM-230ENST00000640388 CUTCQ9NTM9 273 aa2.39□□□□□ -2.03
ATM-230ENST00000640388 TMEM161AQ9NX61 479 aa2.39□□□□□ -2.03
ATM-230ENST00000640388 ABCD2Q9UBJ2 740 aa2.39□□□□□ -2.03
ATM-230ENST00000640388 STX8Q9UNK0 236 aa2.39□□□□□ -2.03
ATM-230ENST00000640388 NAALAD2Q9Y3Q0 740 aa2.39□□□□□ -2.03
ATM-230ENST00000640388 DDX49Q9Y6V7 483 aaKnown RBP2.39□□□□□ -2.03
ATM-230ENST00000640388 PKDREJQ9NTG1 2253 aa2.39□□□□□ -2.03
ATM-230ENST00000640388 NAV1Q8NEY1 1877 aa2.39□□□□□ -2.03
ATM-230ENST00000640388 ROCK2O75116 1388 aaKnown RBP2.38□□□□□ -2.03
ATM-230ENST00000640388 KIAA1549LQ6ZVL6 1849 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 RNF103-CHMP3A0A140T963 221 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 SYT7O43581 403 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 PRPSAP2O60256 369 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 NME6O75414 186 aaPredicted RBP2.38□□□□□ -2.03
ATM-230ENST00000640388 B3GALNT1O75752 331 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 BCAS2O75934 225 aaPredicted RBP2.38□□□□□ -2.03
ATM-230ENST00000640388 FHP07954 510 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 OR9G9P0C7N8 305 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 ODC1P11926 461 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 GYG1P46976 350 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 RPL34P49207 117 aaKnown RBP2.38□□□□□ -2.03
ATM-230ENST00000640388 DHPSP49366 369 aaPredicted RBP2.38□□□□□ -2.03
ATM-230ENST00000640388 YBEYP58557 167 aaPredicted RBP2.38□□□□□ -2.03
ATM-230ENST00000640388 KARSQ15046 597 aaKnown RBP2.38□□□□□ -2.03
ATM-230ENST00000640388 TOR1AIP1Q5JTV8 583 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 AGAP6Q5VW22 663 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 ETFRF1Q6IPR1 90 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 ARMCX5Q6P1M9 558 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 MIER3Q7Z3K6 550 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 BIVMQ86UB2 503 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 SERINC5Q86VE9 423 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 CCDC71Q8IV32 467 aaPredicted RBP2.38□□□□□ -2.03
ATM-230ENST00000640388 PEX5LQ8IYB4 626 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 ARL6IP6Q8N6S5 226 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 COLGALT1Q8NBJ5 622 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 CLEC1AQ8NC01 280 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 OR6T1Q8NGN1 323 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 TAF4BQ92750 862 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 SERAC1Q96JX3 654 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 ZNF559Q9BR84 538 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 NT5DC2Q9H857 520 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 AKIRIN1Q9H9L7 192 aaPredicted RBP2.38□□□□□ -2.03
ATM-230ENST00000640388 HPF1Q9NWY4 346 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 MIS18AQ9NYP9 233 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 AKAP7Q9P0M2 348 aaPredicted RBP2.38□□□□□ -2.03
ATM-230ENST00000640388 DHRS4-AS1Q9P1J3 65 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 TRIM10Q9UDY6 481 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 MAD2L2Q9UI95 211 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 BAZ2BQ9UIF8 2168 aaKnown RBP2.38□□□□□ -2.03
ATM-230ENST00000640388 HOOK1Q9UJC3 728 aaKnown RBP2.38□□□□□ -2.03
ATM-230ENST00000640388 FBXW2Q9UKT8 454 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 Q9Y3F1 56 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 SACSQ9NZJ4 4579 aa2.38□□□□□ -2.03
ATM-230ENST00000640388 CHD3Q12873 2000 aaKnown RBP2.37□□□□□ -2.03
ATM-230ENST00000640388 DLG5Q8TDM6 1919 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 PLXND1Q9Y4D7 1925 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 A0A087X0K7 114 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 TRBV2A0A0J9YWF9 115 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 A0A1W2PQ72 361 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 RSPH10B2B2RC85 870 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 H0YIG0 161 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 CCSO14618 274 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 VEGFDO43915 354 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 SRPX2O60687 465 aaPredicted RBP2.37□□□□□ -2.03
ATM-230ENST00000640388 CSO75390 466 aaKnown RBP2.37□□□□□ -2.03
ATM-230ENST00000640388 CRCPO75575 148 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 OR6A2O95222 327 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 SLC25A27O95847 323 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 ASNSP08243 561 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 RSPH10BP0C881 870 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 DESP17661 470 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 CA8P35219 290 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 ALDH3B1P43353 468 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 MAGEB1P43366 347 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 BRCC3P46736 316 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 CRYBB1P53674 252 aaPredicted RBP2.37□□□□□ -2.03
ATM-230ENST00000640388 SLC34A1Q06495 639 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 CRMP1Q14194 572 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 GAMTQ14353 236 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 STXBP2Q15833 593 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 ACKR1Q16570 336 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 PCK2Q16822 640 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 SLC22A6Q4U2R8 563 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 VWA2Q5GFL6 755 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 REP15Q6BDI9 236 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 CAPN13Q6MZZ7 669 aaPredicted RBP2.37□□□□□ -2.03
ATM-230ENST00000640388 NEK5Q6P3R8 708 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 RFWD3Q6PCD5 774 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 ABRAXAS1Q6UWZ7 409 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 PRSS42Q7Z5A4 293 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 ZGRF1Q86YA3 2104 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 FBXO16Q8IX29 292 aaPredicted RBP2.37□□□□□ -2.03
ATM-230ENST00000640388 KLHDC8AQ8IYD2 350 aa2.37□□□□□ -2.03
ATM-230ENST00000640388 SAMD12Q8N8I0 201 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms