RNA–Protein interactions for RNA: ENST00000640313.1

VPS35-212, Transcript of VPS35, retromer complex component, humanhuman

TSL 5 BASIC

Gene VPS35, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35-212ENST00000640313 IGFBP3P17936 291 aaPredicted RBP0.2□□□□□ -2.38
VPS35-212ENST00000640313 TBPP20226 339 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 TPSB2P20231 275 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 MAGP20916 626 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 VDAC1P21796 283 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 AHCYP23526 432 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 ADORA2BP29275 332 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 PRDX6P30041 224 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 NMT1P30419 496 aaKnown RBP0.2□□□□□ -2.38
VPS35-212ENST00000640313 ADSSP30520 456 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 HTR1FP30939 366 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 AKT2P31751 481 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 PRDX2P32119 198 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 CTNNB1P35222 781 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 NF2P35240 595 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 TNNT3P45378 269 aaPredicted RBP0.2□□□□□ -2.38
VPS35-212ENST00000640313 HTR5AP47898 357 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 RPL29P47914 159 aaKnown RBP0.2□□□□□ -2.38
VPS35-212ENST00000640313 SLC26A2P50443 739 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 LHX2P50458 406 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 HNRNPFP52597 415 aaKnown RBP0.2□□□□□ -2.38
VPS35-212ENST00000640313 APOC4P55056 127 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 CASP9P55211 416 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 PFN3P60673 137 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 RPS8P62241 208 aaKnown RBP0.2□□□□□ -2.38
VPS35-212ENST00000640313 RPS14P62263 151 aaKnown RBP0.2□□□□□ -2.38
VPS35-212ENST00000640313 MRPS11P82912 194 aaKnown RBP0.2□□□□□ -2.38
VPS35-212ENST00000640313 MRPS6P82932 125 aaKnown RBP0.2□□□□□ -2.38
VPS35-212ENST00000640313 VLDLRP98155 873 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 MYBPC1Q00872 1141 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 BCL2L1Q07817 233 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 ST3GAL3Q11203 375 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 ORC2Q13416 577 aaPredicted RBP0.2□□□□□ -2.38
VPS35-212ENST00000640313 SNTB2Q13425 540 aaKnown RBP0.2□□□□□ -2.38
VPS35-212ENST00000640313 TSTA3Q13630 321 aaPredicted RBP0.2□□□□□ -2.38
VPS35-212ENST00000640313 LAGE3Q14657 143 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 C16orf72Q14CZ0 275 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 MORF4L2Q15014 288 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 PTGES3Q15185 160 aaKnown RBP0.2□□□□□ -2.38
VPS35-212ENST00000640313 SF3A2Q15428 464 aaKnown RBP0.2□□□□□ -2.38
VPS35-212ENST00000640313 TPSAB1Q15661 275 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 UBE2V2Q15819 145 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 FAM83EQ2M2I3 478 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 LINC01620Q4KN68 170 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 GPRC6AQ5T6X5 926 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 Q5W150 140 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 SULT1C3Q6IMI6 304 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 ZSCAN25Q6NSZ9 544 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 IGFL1Q6UW32 110 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 CWC27Q6UX04 472 aaKnown RBP0.2□□□□□ -2.38
VPS35-212ENST00000640313 UNC5DQ6UXZ4 953 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 WASH2PQ6VEQ5 465 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 CYS1Q717R9 158 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 ARMCX2Q7L311 632 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 FAM220AQ7Z4H9 259 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 GOLGA7Q7Z5G4 137 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 ANKRD37Q7Z713 158 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 ZNF429Q86V71 674 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 IFNEQ86WN2 208 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 GPBP1Q86WP2 473 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 ERICH1Q86X53 443 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 HIST2H2ABQ8IUE6 130 aaPredicted RBP0.2□□□□□ -2.38
VPS35-212ENST00000640313 ZNF695Q8IW36 515 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 CCDC170Q8IYT3 715 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 SAXO1Q8IYX7 474 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 GCNT2Q8N0V5 402 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 FAM71E2Q8N5Q1 922 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 ALLCQ8N6M5 410 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 LRRC17Q8N6Y2 441 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 NKAPP1Q8N9T2 125 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 OR2T33Q8NG76 320 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 OR5AU1Q8NGC0 362 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 OR2AP1Q8NGE2 309 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 OR52I1Q8NGK6 324 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 OR52J3Q8NH60 311 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 ZNF596Q8TC21 504 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 M1APQ8TC57 530 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 ST7LQ8TDW4 575 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 PAQR8Q8TEZ7 354 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 OR1E3Q8WZA6 343 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 PHYHIPQ92561 330 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 HIST1H2ACQ93077 130 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 NEIL2Q969S2 332 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 UPRTQ96BW1 309 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 FGGYQ96C11 551 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 MRPL38Q96DV4 380 aaKnown RBP0.2□□□□□ -2.38
VPS35-212ENST00000640313 CFAP36Q96G28 342 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 TIMD4Q96H15 378 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 CABS1Q96KC9 395 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 SPATA17Q96L03 361 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 SMIM14Q96QK8 99 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 OR2M2Q96R28 347 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 CDX2Q99626 313 aaPredicted RBP0.2□□□□□ -2.38
VPS35-212ENST00000640313 COQ7Q99807 217 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 ARHGDIGQ99819 225 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 CITED1Q99966 193 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 FEM1AQ9BSK4 669 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 CNPY3Q9BT09 278 aa0.2□□□□□ -2.38
VPS35-212ENST00000640313 WRAP53Q9BUR4 548 aaKnown RBP0.2□□□□□ -2.38
VPS35-212ENST00000640313 TEX13AQ9BXU3 409 aaPredicted RBP0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms