RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 CMIPQ8IY22 773 aa11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 ALDH16A1Q8IZ83 802 aa11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 SVOPQ8N4V2 548 aa11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 SLC38A9Q8NBW4 561 aa11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 ZNF420Q8TAQ5 688 aaPredicted RBP11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 STT3BQ8TCJ2 826 aa11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 OIT3Q8WWZ8 545 aa11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 DAZLQ92904 295 aaKnown RBP11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 FAM46AQ96IP4 442 aaKnown RBP11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 ZNF559Q9BR84 538 aa11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 LHPPQ9H008 270 aa11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 SMOC1Q9H4F8 434 aa11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 CNIH4Q9P003 139 aa11.31□□□□□ -0.6
CACNA1D-228ENST00000638120 SH3D21A4FU49 640 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 FRG2CA6NGY1 282 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 CLCA1A8K7I4 914 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 KLF4O43474 513 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 DCKP27707 260 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 MASP1P48740 699 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 NUDT6P53370 316 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 SNRPGP62308 76 aaKnown RBP11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 CDK5Q00535 292 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 MVKQ03426 396 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 ANGPT1Q15389 498 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 NKAIN1Q4KMZ8 207 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 TMEM201Q5SNT2 666 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 PHF19Q5T6S3 580 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 CASP12Q6UXS9 341 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 B3GNT6Q6ZMB0 384 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 WDR88Q6ZMY6 472 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 MEX3DQ86XN8 651 aaKnown RBP11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 KIF18BQ86Y91 864 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 NRMQ8IXM6 262 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 POGLUT1Q8NBL1 392 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 FAR1Q8WVX9 515 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 TRUB1Q8WWH5 349 aaKnown RBP11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 ADIPOR1Q96A54 375 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 ISOC1Q96CN7 298 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 CLIP3Q96DZ5 547 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 RNF31Q96EP0 1072 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 LMF1Q96S06 567 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 COPS4Q9BT78 406 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 NUDT9Q9BW91 350 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 NXF5Q9H1B4 397 aaKnown RBP11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 SLC25A19Q9HC21 320 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 KRCC1Q9NPI7 259 aaPredicted RBP11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 AGRPO00253 132 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 PIP5K1CO60331 668 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 IL33O95760 270 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 ONECUT2O95948 504 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 HBQ1P09105 142 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 ZGLP1P0C6A0 271 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 ZNF883P0CG24 379 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 SLC5A2P31639 672 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 ACAA2P42765 397 aaKnown RBP11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 GIPRP48546 466 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 OCA2Q04671 838 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 TRA2AQ13595 282 aaKnown RBP eCLIP11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 EBPQ15125 230 aaKnown RBP11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 GPR107Q5VW38 600 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 ZNF385CQ66K41 422 aaPredicted RBP11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 PRR23CQ6ZRP0 262 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 PPP1R3BQ86XI6 285 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 IQCF1Q8N6M8 205 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 OR8J1Q8NGP2 316 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 OR4C3Q8NH37 302 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 TEX47Q8TBZ9 253 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 GGHQ92820 318 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 MYDGFQ969H8 173 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 LCORQ96JN0 433 aaPredicted RBP11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 DOK1Q99704 481 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 PLA2G12AQ9BZM1 189 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 DSN1Q9H410 356 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 EGLN3Q9H6Z9 239 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 TMEM27Q9HBJ8 222 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 CLN6Q9NWW5 311 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 ZNF223Q9UK11 482 aaPredicted RBP11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 NCOR1O75376 2440 aa11.3□□□□□ -0.6
CACNA1D-228ENST00000638120 BDP1A6H8Y1 2624 aa11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 A0A0B4J2E0 115 aa11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 A0A1B0GX12 115 aa11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 SERINC4A6NH21 518 aa11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 ZNF99A8MXY4 864 aaPredicted RBP11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 ADAM11O75078 769 aa11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 FADS2O95864 444 aaKnown RBP11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 STAT5AP42229 794 aa11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 MAP2K4P45985 399 aa11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 GPR4P46093 362 aa11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 SMSP52788 366 aa11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 GP2P55259 537 aaKnown RBP11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 DCAF7P61962 342 aa11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 GINS1Q14691 196 aa11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 TCEAL6Q6IPX3 200 aa11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 LANCL3Q6ZV70 420 aa11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 ZNF550Q7Z398 422 aa11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 BPHLQ86WA6 291 aaPredicted RBP11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 C9orf40Q8IXQ3 194 aa11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 RNF113BQ8IZP6 322 aaKnown RBP11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 LSMEM1Q8N8F7 131 aa11.29□□□□□ -0.6
CACNA1D-228ENST00000638120 OR8D4Q8NGM9 314 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms