RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 ZNF223Q9UK11 482 aaPredicted RBP11.26□□□□□ -0.61
CLN8-212ENST00000637083 CYP8B1Q9UNU6 501 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 NTNG1Q9Y2I2 539 aa11.26□□□□□ -0.61
CLN8-212ENST00000637083 A0A1W2PPC4 97 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 SHISA7A6NL88 538 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 SGK494L7N484 410 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 WWP2O00308 870 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 PIP5K1CO60331 668 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 RNH1P13489 461 aaKnown RBP11.25□□□□□ -0.61
CLN8-212ENST00000637083 DRD5P21918 477 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 GALP22466 123 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 RBM34P42696 430 aaKnown RBP11.25□□□□□ -0.61
CLN8-212ENST00000637083 PSMD4P55036 377 aaKnown RBP11.25□□□□□ -0.61
CLN8-212ENST00000637083 SNRPNP63162 240 aaKnown RBP11.25□□□□□ -0.61
CLN8-212ENST00000637083 BDH1Q02338 343 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 SLC13A2Q13183 592 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 GPR50Q13585 617 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 MAPK14Q16539 360 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 FLYWCH1Q4VC44 716 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 OR2G6Q5TZ20 316 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 C22orf42Q6IC83 251 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 FIGNL1Q6PIW4 674 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 PRSS41Q7RTY9 318 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 ZNF438Q7Z4V0 828 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 GRAMD2AQ8IUY3 354 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 CACTIN-AS1Q8N1I8 211 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 C19orf47Q8N9M1 422 aaKnown RBP11.25□□□□□ -0.61
CLN8-212ENST00000637083 FAM83FQ8NEG4 500 aaPredicted RBP11.25□□□□□ -0.61
CLN8-212ENST00000637083 RBM18Q96H35 190 aaKnown RBP11.25□□□□□ -0.61
CLN8-212ENST00000637083 LMF2Q9BU23 707 aaKnown RBP11.25□□□□□ -0.61
CLN8-212ENST00000637083 TRIM2Q9C040 744 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 TCEAL2Q9H3H9 227 aaPredicted RBP11.25□□□□□ -0.61
CLN8-212ENST00000637083 INPP5EQ9NRR6 644 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 ASB6Q9NWX5 421 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 CBLCQ9ULV8 474 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 CAB39Q9Y376 341 aaPredicted RBP11.25□□□□□ -0.61
CLN8-212ENST00000637083 SF3B6Q9Y3B4 125 aaKnown RBP11.25□□□□□ -0.61
CLN8-212ENST00000637083 LRP4O75096 1905 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 C2CD4DB7Z1M9 353 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 CLDN4O14493 209 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 HCN1O60741 890 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 ZNF217O75362 1048 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 CFL1P23528 166 aaKnown RBP11.25□□□□□ -0.61
CLN8-212ENST00000637083 CTBP2P56545 445 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 STX4Q12846 297 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 EXOSC7Q15024 291 aaKnown RBP11.25□□□□□ -0.61
CLN8-212ENST00000637083 DDI2Q5TDH0 399 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 CD200R1LQ6Q8B3 271 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 MEPCEQ7L2J0 689 aaKnown RBP11.25□□□□□ -0.61
CLN8-212ENST00000637083 ZNF550Q7Z398 422 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 CPOQ8IVL8 374 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 MCATQ8IVS2 390 aaKnown RBP11.25□□□□□ -0.61
CLN8-212ENST00000637083 ZNF595Q8IYB9 648 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 TMEFF1Q8IYR6 380 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 OR8H2Q8N162 312 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 LNX2Q8N448 690 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 TMEM52Q8NDY8 209 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 SIMC1Q8NDZ2 872 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 OR52R1Q8NGF1 315 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 HTRA1Q92743 480 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 BPIFA2Q96DR5 249 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 TCTN2Q96GX1 697 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 ZNF578Q96N58 590 aaPredicted RBP11.25□□□□□ -0.61
CLN8-212ENST00000637083 SECISBP2Q96T21 854 aaKnown RBP11.25□□□□□ -0.61
CLN8-212ENST00000637083 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.25□□□□□ -0.61
CLN8-212ENST00000637083 BARHL1Q9BZE3 327 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 DPH1Q9BZG8 443 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 ZNF576Q9H609 170 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.25□□□□□ -0.61
CLN8-212ENST00000637083 ERVK13-1Q9NX77 482 aa11.25□□□□□ -0.61
CLN8-212ENST00000637083 WSB2Q9NYS7 404 aaPredicted RBP11.25□□□□□ -0.61
CLN8-212ENST00000637083 PAIP2BQ9ULR5 123 aaKnown RBP11.25□□□□□ -0.61
CLN8-212ENST00000637083 SLC22A31A6NKX4 558 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 PEX12O00623 359 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 CDC42EP2O14613 210 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 SNPHO15079 494 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 CHP2O43745 196 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 CTNSO60931 367 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 RDH16O75452 317 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 TRIOO75962 3097 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 KCNK2O95069 426 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 CT62P0C5K7 136 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 GKN3PP0CG01 181 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 IMPDH2P12268 514 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 ST6GAL1P15907 406 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 HTR2AP28223 471 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 RNF144AP50876 292 aaPredicted RBP11.24□□□□□ -0.61
CLN8-212ENST00000637083 BIKQ13323 160 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 ELOCQ15369 112 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 ZNF542PQ5EBM4 170 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 GARNL3Q5VVW2 1013 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 SMARCD3Q6STE5 483 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 LHFPL3Q86UP9 236 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 FANCMQ8IYD8 2048 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 TM9SF4Q92544 642 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 TMEM203Q969S6 136 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 TRMT61AQ96FX7 289 aaKnown RBP11.24□□□□□ -0.61
CLN8-212ENST00000637083 TXNDC15Q96J42 360 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 G6PC3Q9BUM1 346 aa11.24□□□□□ -0.61
CLN8-212ENST00000637083 GPR174Q9BXC1 333 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms