RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 TESK1Q15569 626 aa17.08■□□□□ 0.32
CLN6-213ENST00000636212 MTERF4Q7Z6M4 381 aaKnown RBP17.08■□□□□ 0.32
CLN6-213ENST00000636212 CDC20BQ86Y33 519 aa17.08■□□□□ 0.32
CLN6-213ENST00000636212 METTL25Q8N6Q8 603 aa17.08■□□□□ 0.32
CLN6-213ENST00000636212 ZNF781Q8N8C0 355 aa17.08■□□□□ 0.32
CLN6-213ENST00000636212 B4GALNT2Q8NHY0 566 aa17.08■□□□□ 0.32
CLN6-213ENST00000636212 PHOSPHO1Q8TCT1 267 aa17.08■□□□□ 0.32
CLN6-213ENST00000636212 FIG4Q92562 907 aa17.08■□□□□ 0.32
CLN6-213ENST00000636212 NRGNQ92686 78 aa17.08■□□□□ 0.32
CLN6-213ENST00000636212 PGM2Q96G03 612 aa17.08■□□□□ 0.32
CLN6-213ENST00000636212 SH3YL1Q96HL8 342 aaPredicted RBP17.08■□□□□ 0.32
CLN6-213ENST00000636212 ZNF845Q96IR2 970 aaPredicted RBP17.08■□□□□ 0.32
CLN6-213ENST00000636212 PPP1R36Q96LQ0 422 aa17.08■□□□□ 0.32
CLN6-213ENST00000636212 DACH2Q96NX9 599 aa17.08■□□□□ 0.32
CLN6-213ENST00000636212 SLC39A3Q9BRY0 314 aa17.08■□□□□ 0.32
CLN6-213ENST00000636212 CXorf36Q9H7Y0 433 aa17.08■□□□□ 0.32
CLN6-213ENST00000636212 ASIC5Q9NY37 505 aa17.08■□□□□ 0.32
CLN6-213ENST00000636212 ST6GALNAC2Q9UJ37 374 aa17.08■□□□□ 0.32
CLN6-213ENST00000636212 MCTS1Q9ULC4 181 aaKnown RBP17.08■□□□□ 0.32
CLN6-213ENST00000636212 ACTL7BQ9Y614 415 aa17.08■□□□□ 0.32
CLN6-213ENST00000636212 SH3D21A4FU49 640 aa17.07■□□□□ 0.32
CLN6-213ENST00000636212 ITM2AO43736 263 aa17.07■□□□□ 0.32
CLN6-213ENST00000636212 SYNGR4O95473 234 aa17.07■□□□□ 0.32
CLN6-213ENST00000636212 NUDT14O95848 222 aa17.07■□□□□ 0.32
CLN6-213ENST00000636212 PLGP00747 810 aaPredicted RBP17.07■□□□□ 0.32
CLN6-213ENST00000636212 EIF1AXP47813 144 aaKnown RBP17.07■□□□□ 0.32
CLN6-213ENST00000636212 KCNJ5P48544 419 aa17.07■□□□□ 0.32
CLN6-213ENST00000636212 SLC1A6P48664 564 aa17.07■□□□□ 0.32
CLN6-213ENST00000636212 IST1P53990 364 aa17.07■□□□□ 0.32
CLN6-213ENST00000636212 SIRPAP78324 504 aa17.07■□□□□ 0.32
CLN6-213ENST00000636212 EXOSC6Q5RKV6 272 aaKnown RBP17.07■□□□□ 0.32
CLN6-213ENST00000636212 DCST2Q5T1A1 773 aa17.07■□□□□ 0.32
CLN6-213ENST00000636212 ZAR1Q86SH2 424 aa17.07■□□□□ 0.32
CLN6-213ENST00000636212 RIMKLAQ8IXN7 391 aa17.07■□□□□ 0.32
CLN6-213ENST00000636212 GTPBP8Q8N3Z3 284 aaPredicted RBP17.07■□□□□ 0.32
CLN6-213ENST00000636212 VPS37AQ8NEZ2 397 aa17.07■□□□□ 0.32
CLN6-213ENST00000636212 FNDC9Q8TBE3 224 aa17.07■□□□□ 0.32
CLN6-213ENST00000636212 PAIP2Q9BPZ3 127 aaKnown RBP17.07■□□□□ 0.32
CLN6-213ENST00000636212 DPY30Q9C005 99 aa17.07■□□□□ 0.32
CLN6-213ENST00000636212 FBXO34Q9NWN3 711 aa17.07■□□□□ 0.32
CLN6-213ENST00000636212 RAB21Q9UL25 225 aa17.07■□□□□ 0.32
CLN6-213ENST00000636212 ANKRD17O75179 2603 aaKnown RBP17.07■□□□□ 0.32
CLN6-213ENST00000636212 TACC2O95359 2948 aa17.07■□□□□ 0.32
CLN6-213ENST00000636212 CSMD2Q7Z408 3487 aa17.06■□□□□ 0.32
CLN6-213ENST00000636212 DUXAA6NLW8 204 aa17.06■□□□□ 0.32
CLN6-213ENST00000636212 SHISA8B8ZZ34 492 aa17.06■□□□□ 0.32
CLN6-213ENST00000636212 H0YC42 278 aa17.06■□□□□ 0.32
CLN6-213ENST00000636212 GTPBP1O00178 669 aaKnown RBP17.06■□□□□ 0.32
CLN6-213ENST00000636212 EIF1P41567 113 aaKnown RBP17.06■□□□□ 0.32
CLN6-213ENST00000636212 TPD52P55327 224 aaPredicted RBP17.06■□□□□ 0.32
CLN6-213ENST00000636212 C21orf58P58505 322 aa17.06■□□□□ 0.32
CLN6-213ENST00000636212 RAC1P63000 192 aa17.06■□□□□ 0.32
CLN6-213ENST00000636212 STX3Q13277 289 aa17.06■□□□□ 0.32
CLN6-213ENST00000636212 TMEM44Q2T9K0 475 aa17.06■□□□□ 0.32
CLN6-213ENST00000636212 HHATQ5VTY9 493 aa17.06■□□□□ 0.32
CLN6-213ENST00000636212 CAMKMTQ7Z624 323 aa17.06■□□□□ 0.32
CLN6-213ENST00000636212 CHDHQ8NE62 594 aaPredicted RBP17.06■□□□□ 0.32
CLN6-213ENST00000636212 OR5AK3PQ8NH89 298 aa17.06■□□□□ 0.32
CLN6-213ENST00000636212 STARD4Q96DR4 205 aa17.06■□□□□ 0.32
CLN6-213ENST00000636212 AKTIPQ9H8T0 292 aa17.06■□□□□ 0.32
CLN6-213ENST00000636212 RNF122Q9H9V4 155 aa17.06■□□□□ 0.32
CLN6-213ENST00000636212 CCM2LQ9NUG4 571 aaPredicted RBP17.06■□□□□ 0.32
CLN6-213ENST00000636212 MED17Q9NVC6 651 aa17.06■□□□□ 0.32
CLN6-213ENST00000636212 ELOVL5Q9NYP7 299 aa17.06■□□□□ 0.32
CLN6-213ENST00000636212 PROCRQ9UNN8 238 aa17.06■□□□□ 0.32
CLN6-213ENST00000636212 EMC9Q9Y3B6 208 aa17.06■□□□□ 0.32
CLN6-213ENST00000636212 MED12Q93074 2177 aa17.05■□□□□ 0.32
CLN6-213ENST00000636212 C7orf72A4D263 438 aa17.05■□□□□ 0.32
CLN6-213ENST00000636212 CD79BP40259 229 aa17.05■□□□□ 0.32
CLN6-213ENST00000636212 PCYT1AP49585 367 aa17.05■□□□□ 0.32
CLN6-213ENST00000636212 CTBP2P56545 445 aa17.05■□□□□ 0.32
CLN6-213ENST00000636212 PLPPR5Q32ZL2 321 aa17.05■□□□□ 0.32
CLN6-213ENST00000636212 VWA1Q6PCB0 445 aa17.05■□□□□ 0.32
CLN6-213ENST00000636212 ZNF614Q8N883 585 aa17.05■□□□□ 0.32
CLN6-213ENST00000636212 RNF145Q96MT1 663 aa17.05■□□□□ 0.32
CLN6-213ENST00000636212 FOXC2Q99958 501 aa17.05■□□□□ 0.32
CLN6-213ENST00000636212 FANCFQ9NPI8 374 aa17.05■□□□□ 0.32
CLN6-213ENST00000636212 GPATCH2Q9NW75 528 aa17.05■□□□□ 0.32
CLN6-213ENST00000636212 AK1P00568 194 aa17.04■□□□□ 0.32
CLN6-213ENST00000636212 DHRS4L1P0CG22 281 aa17.04■□□□□ 0.32
CLN6-213ENST00000636212 CD8BP10966 210 aa17.04■□□□□ 0.32
CLN6-213ENST00000636212 POU2F1P14859 743 aa17.04■□□□□ 0.32
CLN6-213ENST00000636212 BGNP21810 368 aa17.04■□□□□ 0.32
CLN6-213ENST00000636212 MATN1P21941 496 aa17.04■□□□□ 0.32
CLN6-213ENST00000636212 KIR2DL2P43627 348 aaPredicted RBP17.04■□□□□ 0.32
CLN6-213ENST00000636212 P2RX1P51575 399 aa17.04■□□□□ 0.32
CLN6-213ENST00000636212 ATP12AP54707 1039 aa17.04■□□□□ 0.32
CLN6-213ENST00000636212 SUMO3P55854 103 aaPredicted RBP17.04■□□□□ 0.32
CLN6-213ENST00000636212 HBA1P69905 142 aa17.04■□□□□ 0.32
CLN6-213ENST00000636212 ANXA8L1Q5VT79 327 aa17.04■□□□□ 0.32
CLN6-213ENST00000636212 GTF2IRD2BQ6EKJ0 949 aa17.04■□□□□ 0.32
CLN6-213ENST00000636212 OR4F3Q6IEY1 312 aa17.04■□□□□ 0.32
CLN6-213ENST00000636212 ESPNLQ6ZVH7 1005 aa17.04■□□□□ 0.32
CLN6-213ENST00000636212 BTLAQ7Z6A9 289 aa17.04■□□□□ 0.32
CLN6-213ENST00000636212 GTF2IRD2Q86UP8 949 aa17.04■□□□□ 0.32
CLN6-213ENST00000636212 GGNQ86UU5 652 aa17.04■□□□□ 0.32
CLN6-213ENST00000636212 LRRC34Q8IZ02 419 aa17.04■□□□□ 0.32
CLN6-213ENST00000636212 OR4A15Q8NGL6 344 aa17.04■□□□□ 0.32
CLN6-213ENST00000636212 OR10D3Q8NH80 312 aa17.04■□□□□ 0.32
CLN6-213ENST00000636212 REXO5Q96IC2 774 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms