RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 NUDT7P0C024 238 aa18.45■□□□□ 0.54
PTCD3-220ENST00000627371 DPP4P27487 766 aa18.45■□□□□ 0.54
PTCD3-220ENST00000627371 MSX1P28360 303 aa18.45■□□□□ 0.54
PTCD3-220ENST00000627371 CRISP3P54108 245 aa18.45■□□□□ 0.54
PTCD3-220ENST00000627371 KCNC4Q03721 635 aa18.45■□□□□ 0.54
PTCD3-220ENST00000627371 GNA13Q14344 377 aa18.45■□□□□ 0.54
PTCD3-220ENST00000627371 ZNF630Q2M218 657 aaPredicted RBP18.45■□□□□ 0.54
PTCD3-220ENST00000627371 WIPI1Q5MNZ9 446 aaPredicted RBP18.45■□□□□ 0.54
PTCD3-220ENST00000627371 YRDCQ86U90 279 aaKnown RBP18.45■□□□□ 0.54
PTCD3-220ENST00000627371 C10orf111Q8N326 155 aa18.45■□□□□ 0.54
PTCD3-220ENST00000627371 PHOSPHO1Q8TCT1 267 aa18.45■□□□□ 0.54
PTCD3-220ENST00000627371 PMM1Q92871 262 aa18.45■□□□□ 0.54
PTCD3-220ENST00000627371 A4GALTQ9NPC4 353 aa18.45■□□□□ 0.54
PTCD3-220ENST00000627371 TAS2R10Q9NYW0 307 aa18.45■□□□□ 0.54
PTCD3-220ENST00000627371 SPRR3Q9UBC9 169 aa18.45■□□□□ 0.54
PTCD3-220ENST00000627371 SERINC4A6NH21 518 aa18.44■□□□□ 0.54
PTCD3-220ENST00000627371 FAM107AO95990 144 aa18.44■□□□□ 0.54
PTCD3-220ENST00000627371 NPPAP01160 153 aa18.44■□□□□ 0.54
PTCD3-220ENST00000627371 CAPRIN1Q14444 709 aaKnown RBP18.44■□□□□ 0.54
PTCD3-220ENST00000627371 MAPK14Q16539 360 aa18.44■□□□□ 0.54
PTCD3-220ENST00000627371 GCNT6Q5T4J0 391 aa18.44■□□□□ 0.54
PTCD3-220ENST00000627371 TREML1Q86YW5 311 aa18.44■□□□□ 0.54
PTCD3-220ENST00000627371 POU5F2Q8N7G0 328 aa18.44■□□□□ 0.54
PTCD3-220ENST00000627371 PCYOX1LQ8NBM8 494 aa18.44■□□□□ 0.54
PTCD3-220ENST00000627371 OR14L1PQ8NHC6 308 aa18.44■□□□□ 0.54
PTCD3-220ENST00000627371 FAM57AQ8TBR7 257 aa18.44■□□□□ 0.54
PTCD3-220ENST00000627371 SARAFQ96BY9 339 aa18.44■□□□□ 0.54
PTCD3-220ENST00000627371 C1GALT1C1Q96EU7 318 aa18.44■□□□□ 0.54
PTCD3-220ENST00000627371 TMEM19Q96HH6 336 aa18.44■□□□□ 0.54
PTCD3-220ENST00000627371 QRSL1Q9H0R6 528 aaKnown RBP18.44■□□□□ 0.54
PTCD3-220ENST00000627371 SUCOQ9UBS9 1254 aaKnown RBP18.44■□□□□ 0.54
PTCD3-220ENST00000627371 MYO7BQ6PIF6 2116 aa18.44■□□□□ 0.54
PTCD3-220ENST00000627371 DSPPQ9NZW4 1301 aa18.44■□□□□ 0.54
PTCD3-220ENST00000627371 DIDO1Q9BTC0 2240 aaKnown RBP18.43■□□□□ 0.54
PTCD3-220ENST00000627371 NPIPA2E9PIF3 369 aa18.43■□□□□ 0.54
PTCD3-220ENST00000627371 NPIPA3F8WFD2 350 aa18.43■□□□□ 0.54
PTCD3-220ENST00000627371 FXYD1O00168 92 aa18.43■□□□□ 0.54
PTCD3-220ENST00000627371 PRRG2O14669 202 aa18.43■□□□□ 0.54
PTCD3-220ENST00000627371 BCKDKO14874 412 aa18.43■□□□□ 0.54
PTCD3-220ENST00000627371 HCRTR2O43614 444 aa18.43■□□□□ 0.54
PTCD3-220ENST00000627371 ZIC3O60481 467 aa18.43■□□□□ 0.54
PTCD3-220ENST00000627371 TPOP07202 933 aa18.43■□□□□ 0.54
PTCD3-220ENST00000627371 COX4I1P13073 169 aa18.43■□□□□ 0.54
PTCD3-220ENST00000627371 RPS4Y1P22090 263 aaKnown RBP18.43■□□□□ 0.54
PTCD3-220ENST00000627371 ADH7P40394 386 aa18.43■□□□□ 0.54
PTCD3-220ENST00000627371 CA7P43166 264 aa18.43■□□□□ 0.54
PTCD3-220ENST00000627371 RNF144AP50876 292 aaPredicted RBP18.43■□□□□ 0.54
PTCD3-220ENST00000627371 CASP6P55212 293 aa18.43■□□□□ 0.54
PTCD3-220ENST00000627371 MTPNP58546 118 aa18.43■□□□□ 0.54
PTCD3-220ENST00000627371 ZNF117Q03924 483 aa18.43■□□□□ 0.54
PTCD3-220ENST00000627371 SELPLGQ14242 412 aa18.43■□□□□ 0.54
PTCD3-220ENST00000627371 FGFBP1Q14512 234 aa18.43■□□□□ 0.54
PTCD3-220ENST00000627371 C3AR1Q16581 482 aa18.43■□□□□ 0.54
PTCD3-220ENST00000627371 NHSL2Q5HYW2 709 aa18.43■□□□□ 0.54
PTCD3-220ENST00000627371 IFNEQ86WN2 208 aa18.43■□□□□ 0.54
PTCD3-220ENST00000627371 B4GALNT2Q8NHY0 566 aa18.43■□□□□ 0.54
PTCD3-220ENST00000627371 MAL2Q969L2 176 aa18.43■□□□□ 0.54
PTCD3-220ENST00000627371 LRRC58Q96CX6 371 aa18.43■□□□□ 0.54
PTCD3-220ENST00000627371 ZG16BQ96DA0 208 aa18.43■□□□□ 0.54
PTCD3-220ENST00000627371 SH3YL1Q96HL8 342 aaPredicted RBP18.43■□□□□ 0.54
PTCD3-220ENST00000627371 TREX2Q9BQ50 279 aaPredicted RBP18.43■□□□□ 0.54
PTCD3-220ENST00000627371 TRIM8Q9BZR9 551 aa18.43■□□□□ 0.54
PTCD3-220ENST00000627371 MTHFD2LQ9H903 347 aaPredicted RBP18.43■□□□□ 0.54
PTCD3-220ENST00000627371 SLC6A5Q9Y345 797 aa18.43■□□□□ 0.54
PTCD3-220ENST00000627371 L3MBTL1Q9Y468 752 aa18.43■□□□□ 0.54
PTCD3-220ENST00000627371 PHF3Q92576 2039 aaKnown RBP18.43■□□□□ 0.54
PTCD3-220ENST00000627371 ARHGAP21Q5T5U3 1957 aa18.42■□□□□ 0.54
PTCD3-220ENST00000627371 C15orf38-AP3S2A0A0A6YYH1 394 aa18.42■□□□□ 0.54
PTCD3-220ENST00000627371 TRGV8A0A0C4DH27 118 aa18.42■□□□□ 0.54
PTCD3-220ENST00000627371 AGAP5A6NIR3 686 aa18.42■□□□□ 0.54
PTCD3-220ENST00000627371 ZNF264O43296 627 aa18.42■□□□□ 0.54
PTCD3-220ENST00000627371 GMFGO60234 142 aa18.42■□□□□ 0.54
PTCD3-220ENST00000627371 ARAFP10398 606 aa18.42■□□□□ 0.54
PTCD3-220ENST00000627371 UBL4AP11441 157 aa18.42■□□□□ 0.54
PTCD3-220ENST00000627371 GCKP35557 465 aa18.42■□□□□ 0.54
PTCD3-220ENST00000627371 SUMO3P55854 103 aaPredicted RBP18.42■□□□□ 0.54
PTCD3-220ENST00000627371 CRYZQ08257 329 aaKnown RBP18.42■□□□□ 0.54
PTCD3-220ENST00000627371 PRAMEF8Q5VWM4 474 aa18.42■□□□□ 0.54
PTCD3-220ENST00000627371 C1QL3Q5VWW1 255 aa18.42■□□□□ 0.54
PTCD3-220ENST00000627371 PRAMEF7Q5VXH5 474 aa18.42■□□□□ 0.54
PTCD3-220ENST00000627371 CBLN3Q6UW01 205 aa18.42■□□□□ 0.54
PTCD3-220ENST00000627371 CD163Q86VB7 1156 aa18.42■□□□□ 0.54
PTCD3-220ENST00000627371 METTL25Q8N6Q8 603 aa18.42■□□□□ 0.54
PTCD3-220ENST00000627371 ANKS4BQ8N8V4 417 aa18.42■□□□□ 0.54
PTCD3-220ENST00000627371 RCN3Q96D15 328 aa18.42■□□□□ 0.54
PTCD3-220ENST00000627371 SLC39A3Q9BRY0 314 aa18.42■□□□□ 0.54
PTCD3-220ENST00000627371 THUMPD3Q9BV44 507 aaKnown RBP18.42■□□□□ 0.54
PTCD3-220ENST00000627371 TMEM38AQ9H6F2 299 aa18.42■□□□□ 0.54
PTCD3-220ENST00000627371 BCL2L10Q9HD36 194 aa18.42■□□□□ 0.54
PTCD3-220ENST00000627371 GID8Q9NWU2 228 aa18.42■□□□□ 0.54
PTCD3-220ENST00000627371 TNFRSF10DQ9UBN6 386 aa18.42■□□□□ 0.54
PTCD3-220ENST00000627371 TINAGQ9UJW2 476 aa18.42■□□□□ 0.54
PTCD3-220ENST00000627371 ICAM5Q9UMF0 924 aa18.42■□□□□ 0.54
PTCD3-220ENST00000627371 SLC35A3Q9Y2D2 325 aa18.42■□□□□ 0.54
PTCD3-220ENST00000627371 CARD8Q9Y2G2 431 aa18.42■□□□□ 0.54
PTCD3-220ENST00000627371 A0A0G2JPF8 293 aa18.41■□□□□ 0.54
PTCD3-220ENST00000627371 A0A1B0GUH1 482 aa18.41■□□□□ 0.54
PTCD3-220ENST00000627371 HNRNPCL2B2RXH8 293 aa18.41■□□□□ 0.54
PTCD3-220ENST00000627371 HNRNPCL3B7ZW38 293 aa18.41■□□□□ 0.54
PTCD3-220ENST00000627371 GTPBP1O00178 669 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms