RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 A0A087X1B8 175 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 LNP1A1A4G5 178 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 SLC22A23A1A5C7 686 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 C9orf170A2RU37 121 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 SAC3D1A6NKF1 404 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 H0YAE9 185 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 PRAMEF10O60809 474 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 PRAMEF2O60811 474 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 CRHP06850 196 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 SLC19A1P41440 591 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 NUTF2P61970 127 aaKnown RBP11.28□□□□□ -0.6
SRRT-216ENST00000618262 ATP6AP1Q15904 470 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 NHSL2Q5HYW2 709 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 SPESP1Q6UW49 350 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 SELENOHQ8IZQ5 122 aaKnown RBP11.28□□□□□ -0.6
SRRT-216ENST00000618262 THAP3Q8WTV1 239 aaPredicted RBP11.28□□□□□ -0.6
SRRT-216ENST00000618262 CXorf40BQ96DE9 158 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 ZNF385AQ96PM9 386 aaKnown RBP11.28□□□□□ -0.6
SRRT-216ENST00000618262 DCLRE1CQ96SD1 692 aaKnown RBP11.28□□□□□ -0.6
SRRT-216ENST00000618262 FUNDC2Q9BWH2 189 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 LHPPQ9H008 270 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 EQTNQ9NQ60 294 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 TEX10Q9NXF1 929 aaPredicted RBP11.28□□□□□ -0.6
SRRT-216ENST00000618262 UNC13CQ8NB66 2214 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 G3V2L1 256 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 ARPC5O15511 151 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 AP2A2O94973 939 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 PLA2G16P53816 162 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 PCLAFQ15004 111 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 TOMM34Q15785 309 aaPredicted RBP11.28□□□□□ -0.6
SRRT-216ENST00000618262 BCL7AQ4VC05 210 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 TECRLQ5HYJ1 363 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 ZNF773Q6PK81 442 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 RBMS3Q6XE24 437 aaKnown RBP11.28□□□□□ -0.6
SRRT-216ENST00000618262 TIFABQ6ZNK6 161 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 SVOPLQ8N434 492 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 ZDHHC1Q8WTX9 485 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 APOL4Q9BPW4 351 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 SLC6A16Q9GZN6 736 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 MCUBQ9NWR8 336 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 PURGQ9UJV8 347 aaKnown RBP11.28□□□□□ -0.6
SRRT-216ENST00000618262 FANCMQ8IYD8 2048 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 DUXAA6NLW8 204 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 TMEM233B4DJY2 109 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 G3V2T6 193 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 NPHS1O60500 1241 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 SLCO2B1O94956 709 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 HIST1H2AGP0C0S8 130 aaPredicted RBP11.28□□□□□ -0.6
SRRT-216ENST00000618262 OR8G3PP0DMU2 310 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 MTHFD2P13995 350 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 HIST1H2ADP20671 130 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 PRDX3P30048 256 aaKnown RBP11.28□□□□□ -0.6
SRRT-216ENST00000618262 ARRB2P32121 409 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 CDKN2CP42773 168 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 MAGEA12P43365 314 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 XKP51811 444 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 SLAMF1Q13291 335 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 RPE65Q16518 533 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 RNF212Q495C1 297 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 SMIM15Q7Z3B0 74 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 PLD3Q8IV08 490 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 C12orf45Q8N5I9 185 aaPredicted RBP11.28□□□□□ -0.6
SRRT-216ENST00000618262 STAG3L4Q8TBR4 150 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 CREB3L4Q8TEY5 395 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 ASB11Q8WXH4 323 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 FKBP10Q96AY3 582 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 HIST1H2AHQ96KK5 128 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 HIST1H2AJQ99878 128 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 H2AFJQ9BTM1 129 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 SEMA6CQ9H3T2 930 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 KRT84Q9NSB2 600 aa11.28□□□□□ -0.6
SRRT-216ENST00000618262 PUS1Q9Y606 427 aaKnown RBP eCLIP11.28□□□□□ -0.6
SRRT-216ENST00000618262 TMEM131Q92545 1883 aa11.27□□□□□ -0.6
SRRT-216ENST00000618262 RPS10-NUDT3A0A1W2PQS6 291 aa11.27□□□□□ -0.61
SRRT-216ENST00000618262 A8MT66 165 aa11.27□□□□□ -0.61
SRRT-216ENST00000618262 GUSBP08236 651 aa11.27□□□□□ -0.61
SRRT-216ENST00000618262 H2AFB1P0C5Y9 115 aa11.27□□□□□ -0.61
SRRT-216ENST00000618262 H2AFB2P0C5Z0 115 aa11.27□□□□□ -0.61
SRRT-216ENST00000618262 NME1P15531 152 aaKnown RBP11.27□□□□□ -0.61
SRRT-216ENST00000618262 GTF2E2P29084 291 aaKnown RBP11.27□□□□□ -0.61
SRRT-216ENST00000618262 CAMLGP49069 296 aa11.27□□□□□ -0.61
SRRT-216ENST00000618262 ARRB1P49407 418 aaPredicted RBP11.27□□□□□ -0.61
SRRT-216ENST00000618262 SHBQ15464 509 aa11.27□□□□□ -0.61
SRRT-216ENST00000618262 BAK1Q16611 211 aa11.27□□□□□ -0.61
SRRT-216ENST00000618262 LAMTOR1Q6IAA8 161 aa11.27□□□□□ -0.61
SRRT-216ENST00000618262 SLC22A15Q8IZD6 547 aa11.27□□□□□ -0.61
SRRT-216ENST00000618262 FBXO39Q8N4B4 442 aa11.27□□□□□ -0.61
SRRT-216ENST00000618262 RNF175Q8N4F7 328 aa11.27□□□□□ -0.61
SRRT-216ENST00000618262 DERL2Q9GZP9 239 aa11.27□□□□□ -0.61
SRRT-216ENST00000618262 KLHL21Q9UJP4 597 aa11.27□□□□□ -0.61
SRRT-216ENST00000618262 POLR3HQ9Y535 204 aaPredicted RBP11.27□□□□□ -0.61
SRRT-216ENST00000618262 KCNMB2Q9Y691 235 aa11.27□□□□□ -0.61
SRRT-216ENST00000618262 A0A0U1RQK1 487 aa11.27□□□□□ -0.61
SRRT-216ENST00000618262 ZNF320A2RRD8 509 aa11.27□□□□□ -0.61
SRRT-216ENST00000618262 NPIPB8E9PQR5 432 aa11.27□□□□□ -0.61
SRRT-216ENST00000618262 C1orf105O95561 183 aa11.27□□□□□ -0.61
SRRT-216ENST00000618262 SPI1P17947 270 aa11.27□□□□□ -0.61
SRRT-216ENST00000618262 NME5P56597 212 aa11.27□□□□□ -0.61
SRRT-216ENST00000618262 UBAP2LQ14157 1087 aaKnown RBP11.27□□□□□ -0.61
SRRT-216ENST00000618262 GPR18Q14330 331 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms