RNA–Protein interactions for RNA: ENST00000613223.1

SEMA6C-209, Transcript of semaphorin 6C, humanhuman

TSL 5 BASIC

Gene SEMA6C, Length 1,950 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-209ENST00000613223 USP43Q70EL4 1123 aa16.59■□□□□ 0.25
SEMA6C-209ENST00000613223 ZAR1Q86SH2 424 aa16.59■□□□□ 0.25
SEMA6C-209ENST00000613223 SLC22A16Q86VW1 577 aa16.59■□□□□ 0.25
SEMA6C-209ENST00000613223 KIF18BQ86Y91 864 aa16.59■□□□□ 0.25
SEMA6C-209ENST00000613223 IQCF1Q8N6M8 205 aa16.59■□□□□ 0.25
SEMA6C-209ENST00000613223 FAM46AQ96IP4 442 aaKnown RBP16.59■□□□□ 0.25
SEMA6C-209ENST00000613223 SLC41A2Q96JW4 573 aa16.59■□□□□ 0.25
SEMA6C-209ENST00000613223 CNPPD1Q9BV87 410 aa16.59■□□□□ 0.25
SEMA6C-209ENST00000613223 POLDIP3Q9BY77 421 aaKnown RBP16.59■□□□□ 0.25
SEMA6C-209ENST00000613223 SLC25A19Q9HC21 320 aa16.59■□□□□ 0.25
SEMA6C-209ENST00000613223 GMEB2Q9UKD1 530 aa16.59■□□□□ 0.25
SEMA6C-209ENST00000613223 SLC7A7Q9UM01 511 aa16.59■□□□□ 0.25
SEMA6C-209ENST00000613223 MAU2Q9Y6X3 613 aa16.59■□□□□ 0.25
SEMA6C-209ENST00000613223 CACNA1EQ15878 2313 aa16.59■□□□□ 0.25
SEMA6C-209ENST00000613223 TRAPPC13A5PLN9 417 aa16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 OR2W5A6NFC9 320 aa16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 SAGE2PA6NJ88 616 aa16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 ENTPD6O75354 484 aa16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 UPK1BO75841 260 aa16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 PRG2P13727 222 aa16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 FPR3P25089 353 aa16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 SLC15A1P46059 708 aa16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 SMSP52788 366 aa16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 CDK5Q00535 292 aa16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 TIGD6Q17RP2 521 aa16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 SNAP47Q5SQN1 464 aa16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 PMS2CLQ68D20 193 aa16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 WDR74Q6RFH5 385 aaPredicted RBP16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 RASSF6Q6ZTQ3 369 aa16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 MED25Q71SY5 747 aa16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 SLC46A3Q7Z3Q1 461 aa16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 KMT5CQ86Y97 462 aa16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 TEX47Q8TBZ9 253 aa16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 CPNE5Q9HCH3 593 aa16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 LANCL2Q9NS86 450 aa16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 TVP23BQ9NYZ1 205 aa16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 NLGN3Q9NZ94 848 aa16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 CNIH4Q9P003 139 aa16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 TESQ9UGI8 421 aaKnown RBP16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 ERVK-19Q9WJR5 959 aa16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 DTX4Q9Y2E6 619 aa16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 UGT2A1Q9Y4X1 527 aa16.58■□□□□ 0.25
SEMA6C-209ENST00000613223 NTN1O95631 604 aa16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 IFNA16P05015 189 aa16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 GKN3PP0CG01 181 aa16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 MYF5P13349 255 aa16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 HTR2AP28223 471 aa16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 EPHA8P29322 1005 aaPredicted RBP16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 GCGRP47871 477 aa16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 RFX3P48380 749 aa16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 PCYT1AP49585 367 aa16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 IRF3Q14653 427 aa16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 OCLNQ16625 522 aa16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 ZNF181Q2M3W8 571 aa16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 ZC3H14Q6PJT7 736 aaKnown RBP16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 NPSR1Q6W5P4 371 aa16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 WDR5BQ86VZ2 330 aa16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 MEX3DQ86XN8 651 aaKnown RBP16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 NRMQ8IXM6 262 aa16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 TCEANCQ8N8B7 351 aa16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 OR1L3Q8NH93 324 aa16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 C9orf43Q8TAL5 461 aaPredicted RBP16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 TMEM255BQ8WV15 326 aa16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 OR1F2PQ96R84 312 aa16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 PLA2G12AQ9BZM1 189 aa16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 NXF2Q9GZY0 626 aaKnown RBP16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 ZBTB20Q9HC78 741 aaPredicted RBP16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 Q9N2J8 555 aa16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 KRCC1Q9NPI7 259 aaPredicted RBP16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 MMACHCQ9Y4U1 282 aa16.58■□□□□ 0.24
SEMA6C-209ENST00000613223 CABIN1Q9Y6J0 2220 aa16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 TTC36A6NLP5 189 aa16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 MSL3P1P0C860 447 aa16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 STAT5AP42229 794 aa16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 PGDP52209 483 aa16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 SLC25A30Q5SVS4 291 aa16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 GPR135Q8IZ08 494 aa16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 FAM26EQ8N5C1 309 aa16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 OR4N2Q8NGD1 307 aa16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 C16orf52Q8NHV5 167 aa16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 CDCA4Q9BXL8 241 aa16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 OR10A5Q9H207 317 aa16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 EGLN3Q9H6Z9 239 aa16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 PRMT8Q9NR22 394 aaPredicted RBP16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 C14orf105Q9NVL8 296 aa16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 DNAJC27Q9NZQ0 273 aa16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 SUSD2Q9UGT4 822 aa16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 ARID1BQ8NFD5 2236 aaPredicted RBP16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 ASXL3Q9C0F0 2248 aa16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 KLF4O43474 513 aa16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 HYAL3O43820 417 aaPredicted RBP16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 PRKYO43930 277 aa16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 IGKV1D-16P01601 117 aa16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 RPLP0P05388 317 aaKnown RBP16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 ADORA3P0DMS8 318 aa16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 TDGF1P13385 188 aa16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 DRD5P21918 477 aa16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 ALAS2P22557 587 aa16.57■□□□□ 0.24
SEMA6C-209ENST00000613223 GADD45AP24522 165 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms