RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 PCED1AQ9H1Q7 454 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 NEK6Q9HC98 313 aa13.68□□□□□ -0.22
CDH1-213ENST00000612417 EXOGQ9Y2C4 368 aaKnown RBP13.68□□□□□ -0.22
CDH1-213ENST00000612417 KIR2DS5A0A0G2JLQ3 304 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 A0A0G2JNG1 304 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 B4DGG1 531 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 KIR2DS3K7RE56 304 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 THY1P04216 161 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 TRAPPC2P0DI81 140 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 TRAPPC2BP0DI82 140 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 GNSP15586 552 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 AZGP1P25311 298 aaKnown RBP13.67□□□□□ -0.22
CDH1-213ENST00000612417 AVPR1BP47901 424 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 PDX1P52945 283 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 RACK1P63244 317 aaKnown RBP13.67□□□□□ -0.22
CDH1-213ENST00000612417 BTN3A2P78410 334 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 FABP5Q01469 135 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 KIR2DS3Q14952 304 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 KIR2DS5Q14953 304 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 LTB4RQ15722 352 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 ZNF628Q5EBL2 1059 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 RSBN1Q5VWQ0 802 aaPredicted RBP13.67□□□□□ -0.22
CDH1-213ENST00000612417 PLEKHM3Q6ZWE6 761 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 MBOAT2Q6ZWT7 520 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 NKAIN4Q8IVV8 208 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 LRRC25Q8N386 305 aaPredicted RBP13.67□□□□□ -0.22
CDH1-213ENST00000612417 ADAMTS15Q8TE58 950 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 ZDHHC1Q8WTX9 485 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 KAT2AQ92830 837 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 ZNF649Q9BS31 505 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 LRRC61Q9BV99 259 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 ANKRA2Q9H9E1 313 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 PRDM9Q9NQV7 894 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 POT1Q9NUX5 634 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 ZNF221Q9UK13 617 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 ZNF443Q9Y2A4 671 aaPredicted RBP13.67□□□□□ -0.22
CDH1-213ENST00000612417 FABP12A6NFH5 140 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 POLR1CO15160 346 aaPredicted RBP13.67□□□□□ -0.22
CDH1-213ENST00000612417 FCMRO60667 390 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 KRT8P05787 483 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 CSF3P09919 207 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 TNFRSF17Q02223 184 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 RGS1Q08116 209 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 PGGHGQ32M88 737 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 CLEC12AQ5QGZ9 265 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 SLC30A6Q6NXT4 461 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 FAM111BQ6SJ93 734 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 GDF7Q7Z4P5 450 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 ZNF761Q86XN6 746 aaPredicted RBP13.67□□□□□ -0.22
CDH1-213ENST00000612417 ARIH2OSQ8N7S6 290 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 SLC16A11Q8NCK7 471 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 OR7G2Q8NG99 324 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 OR52N1Q8NH53 320 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 ZFPM2Q8WW38 1151 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 SLC41A3Q96GZ6 507 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 DIRAS2Q96HU8 199 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 MCHR1Q99705 422 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 TM9SF2Q99805 663 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 SLC22A4Q9H015 551 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 SYNDIG1Q9H7V2 258 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 MTHFD2LQ9H903 347 aaPredicted RBP13.67□□□□□ -0.22
CDH1-213ENST00000612417 TIGARQ9NQ88 270 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 CDH10Q9Y6N8 788 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 EML5Q05BV3 1969 aa13.67□□□□□ -0.22
CDH1-213ENST00000612417 THADAQ6YHU6 1953 aa13.66□□□□□ -0.22
CDH1-213ENST00000612417 VCANP13611 3396 aa13.66□□□□□ -0.22
CDH1-213ENST00000612417 A0A1W2PR77 199 aa13.66□□□□□ -0.22
CDH1-213ENST00000612417 A8MU76 341 aa13.66□□□□□ -0.22
CDH1-213ENST00000612417 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.66□□□□□ -0.22
CDH1-213ENST00000612417 RGS13O14921 159 aa13.66□□□□□ -0.22
CDH1-213ENST00000612417 CHST10O43529 356 aa13.66□□□□□ -0.22
CDH1-213ENST00000612417 AKAP8O43823 692 aaKnown RBP13.66□□□□□ -0.22
CDH1-213ENST00000612417 BCKDHBP21953 392 aa13.66□□□□□ -0.22
CDH1-213ENST00000612417 HTR1FP30939 366 aa13.66□□□□□ -0.22
CDH1-213ENST00000612417 UBE2IP63279 158 aaKnown RBP13.66□□□□□ -0.22
CDH1-213ENST00000612417 ZNF155Q12901 538 aaPredicted RBP13.66□□□□□ -0.22
CDH1-213ENST00000612417 ARHGAP11BQ3KRB8 267 aa13.66□□□□□ -0.22
CDH1-213ENST00000612417 OR2L13Q8N349 312 aa13.66□□□□□ -0.22
CDH1-213ENST00000612417 SYT14Q8NB59 555 aa13.66□□□□□ -0.22
CDH1-213ENST00000612417 KCT2Q8NC54 265 aa13.66□□□□□ -0.22
CDH1-213ENST00000612417 LMX1AQ8TE12 382 aa13.66□□□□□ -0.22
CDH1-213ENST00000612417 TWSG1Q9GZX9 223 aa13.66□□□□□ -0.22
CDH1-213ENST00000612417 ACTR10Q9NZ32 417 aa13.66□□□□□ -0.22
CDH1-213ENST00000612417 NLGN3Q9NZ94 848 aa13.66□□□□□ -0.22
CDH1-213ENST00000612417 KCMF1Q9P0J7 381 aa13.66□□□□□ -0.22
CDH1-213ENST00000612417 PHF11Q9UIL8 331 aa13.66□□□□□ -0.22
CDH1-213ENST00000612417 NTN1O95631 604 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 CSF2P04141 144 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 ZNF888P0CJ79 500 aaPredicted RBP13.65□□□□□ -0.22
CDH1-213ENST00000612417 UGT2B7P16662 529 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 GALP22466 123 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 DDOSTP39656 456 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 CD79BP40259 229 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 NR4A2P43354 598 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 NKX2-5P52952 324 aaPredicted RBP13.65□□□□□ -0.22
CDH1-213ENST00000612417 PPP3R1P63098 170 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 IFITM2Q01629 132 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 HHEXQ03014 270 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 ELOCQ15369 112 aa13.65□□□□□ -0.22
CDH1-213ENST00000612417 ATAD3CQ5T2N8 411 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms