RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 B4GALNT2Q8NHY0 566 aa15.75■□□□□ 0.11
SHKBP1-223ENST00000600552 OSTF1Q92882 214 aa15.75■□□□□ 0.11
SHKBP1-223ENST00000600552 CDS1Q92903 461 aa15.75■□□□□ 0.11
SHKBP1-223ENST00000600552 GIMAP5Q96F15 307 aa15.75■□□□□ 0.11
SHKBP1-223ENST00000600552 GMPPAQ96IJ6 420 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-223ENST00000600552 METTL2AQ96IZ6 378 aaKnown RBP15.75■□□□□ 0.11
SHKBP1-223ENST00000600552 ZCCHC3Q9NUD5 404 aaKnown RBP15.75■□□□□ 0.11
SHKBP1-223ENST00000600552 MID2Q9UJV3 735 aa15.75■□□□□ 0.11
SHKBP1-223ENST00000600552 A0A0J9YW62 118 aa15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 TRIM64A6NGJ6 449 aa15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 TRIM64BA6NI03 449 aa15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 NTN1O95631 604 aa15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 THBDP07204 575 aa15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 CHRNGP07510 517 aa15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 BCKDHAP12694 445 aa15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 ZNF17P17021 662 aa15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 IL11P20809 199 aa15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 PRIM2P49643 509 aa15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 CARD18P57730 90 aa15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 LASP1Q14847 261 aaKnown RBP15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 PLPPR5Q32ZL2 321 aa15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 SPDYE7PQ495Y7 208 aa15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 PDSS1Q5T2R2 415 aa15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 KANK2Q63ZY3 851 aa15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 LRIG3Q6UXM1 1119 aa15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 GTPBP8Q8N3Z3 284 aaPredicted RBP15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 OR7A2PQ8NGA2 310 aa15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 RFWD2Q8NHY2 731 aa15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 PHOSPHO1Q8TCT1 267 aa15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 NUDT8Q8WV74 236 aa15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 TWIST2Q8WVJ9 160 aa15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 ZBTB8AQ96BR9 441 aa15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 PLSCR4Q9NRQ2 329 aa15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 UBQLN4Q9NRR5 601 aa15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 TRAF6Q9Y4K3 522 aa15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 NUP214P35658 2090 aaPredicted RBP15.74■□□□□ 0.11
SHKBP1-223ENST00000600552 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 PIP5K1BO14986 540 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 LSM1O15116 133 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 PEX11AO75192 247 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 SPAG7O75391 227 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 PLAUP00749 431 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 ATP6V1C1P21283 382 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 PCSK6P29122 969 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 ALDH3A1P30838 453 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 HPCAL1P37235 193 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 MAP3K8P41279 467 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 ASMTP46597 345 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 SERPINB4P48594 390 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 RAC1P63000 192 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 TP53BP2Q13625 1128 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 GUSBP1Q15486 140 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 CD226Q15762 336 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 STAC2Q6ZMT1 411 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 C20orf204Q6ZNR8 217 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 PLEKHM3Q6ZWE6 761 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 R3HCC1LQ7Z5L2 792 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 CNPY4Q8N129 248 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 LILRA2Q8N149 483 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 ZNF614Q8N883 585 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 OR2W6PQ8NHA6 318 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 POC1BQ8TC44 478 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 FAM110BQ8TC76 370 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 FAM120BQ96EK7 910 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 PLPPR2Q96GM1 343 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 REXO5Q96IC2 774 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 PIP5K1AQ99755 562 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 C1orf50Q9BV19 199 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 MECRQ9BV79 373 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 BTBD2Q9BX70 525 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 ACSS1Q9NUB1 689 aaPredicted RBP15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 DNAJC15Q9Y5T4 150 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 PRR14LQ5THK1 2151 aa15.73■□□□□ 0.11
SHKBP1-223ENST00000600552 GTPBP1O00178 669 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-223ENST00000600552 OIP5O43482 229 aa15.72■□□□□ 0.11
SHKBP1-223ENST00000600552 SS18L1O75177 396 aaPredicted RBP15.72■□□□□ 0.11
SHKBP1-223ENST00000600552 SLU7O95391 586 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-223ENST00000600552 HMGN2P05204 90 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-223ENST00000600552 HEXAP06865 529 aa15.72■□□□□ 0.11
SHKBP1-223ENST00000600552 IFI6P09912 130 aa15.72■□□□□ 0.11
SHKBP1-223ENST00000600552 LAMP1P11279 417 aa15.72■□□□□ 0.11
SHKBP1-223ENST00000600552 SHC1P29353 583 aa15.72■□□□□ 0.11
SHKBP1-223ENST00000600552 PCYT1AP49585 367 aa15.72■□□□□ 0.11
SHKBP1-223ENST00000600552 FOXF1Q12946 379 aa15.72■□□□□ 0.11
SHKBP1-223ENST00000600552 PDE7AQ13946 482 aa15.72■□□□□ 0.11
SHKBP1-223ENST00000600552 TSC22D1Q15714 1073 aa15.72■□□□□ 0.11
SHKBP1-223ENST00000600552 ARL13AQ5H913 290 aaPredicted RBP15.72■□□□□ 0.11
SHKBP1-223ENST00000600552 BEX5Q5H9J7 111 aa15.72■□□□□ 0.11
SHKBP1-223ENST00000600552 CDC73Q6P1J9 531 aa15.72■□□□□ 0.11
SHKBP1-223ENST00000600552 ZCCHC23Q6ZST2 131 aa15.72■□□□□ 0.11
SHKBP1-223ENST00000600552 ESPNLQ6ZVH7 1005 aa15.72■□□□□ 0.11
SHKBP1-223ENST00000600552 STK32CQ86UX6 486 aa15.72■□□□□ 0.11
SHKBP1-223ENST00000600552 TDRPQ86YL5 185 aa15.72■□□□□ 0.11
SHKBP1-223ENST00000600552 LRRC75A-AS1Q8N1F1 130 aa15.72■□□□□ 0.11
SHKBP1-223ENST00000600552 HOXB13Q92826 284 aaPredicted RBP15.72■□□□□ 0.11
SHKBP1-223ENST00000600552 ADGRG7Q96K78 797 aa15.72■□□□□ 0.11
SHKBP1-223ENST00000600552 MARK4Q96L34 752 aa15.72■□□□□ 0.11
SHKBP1-223ENST00000600552 FCRL1Q96LA6 429 aa15.72■□□□□ 0.11
SHKBP1-223ENST00000600552 BDH2Q9BUT1 245 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms