RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 HSPB3Q12988 150 aa12.62□□□□□ -0.39
SHKBP1-218ENST00000598907 VEZF1Q14119 521 aa12.62□□□□□ -0.39
SHKBP1-218ENST00000598907 TRMT5Q32P41 509 aaKnown RBP12.62□□□□□ -0.39
SHKBP1-218ENST00000598907 MMEL1Q495T6 779 aa12.62□□□□□ -0.39
SHKBP1-218ENST00000598907 FAM111BQ6SJ93 734 aa12.62□□□□□ -0.39
SHKBP1-218ENST00000598907 FBXO27Q8NI29 283 aa12.62□□□□□ -0.39
SHKBP1-218ENST00000598907 RIT1Q92963 219 aa12.62□□□□□ -0.39
SHKBP1-218ENST00000598907 LRRC58Q96CX6 371 aa12.62□□□□□ -0.39
SHKBP1-218ENST00000598907 TRIB1Q96RU8 372 aa12.62□□□□□ -0.39
SHKBP1-218ENST00000598907 ZNF703Q9H7S9 590 aaPredicted RBP12.62□□□□□ -0.39
SHKBP1-218ENST00000598907 PNO1Q9NRX1 252 aaKnown RBP12.62□□□□□ -0.39
SHKBP1-218ENST00000598907 SACM1LQ9NTJ5 587 aa12.62□□□□□ -0.39
SHKBP1-218ENST00000598907 VAPAQ9P0L0 249 aa12.62□□□□□ -0.39
SHKBP1-218ENST00000598907 PCDHGB4Q9UN71 923 aa12.62□□□□□ -0.39
SHKBP1-218ENST00000598907 PPIEQ9UNP9 301 aaKnown RBP12.62□□□□□ -0.39
SHKBP1-218ENST00000598907 PCDHB14Q9Y5E9 798 aa12.62□□□□□ -0.39
SHKBP1-218ENST00000598907 MEGF8Q7Z7M0 2845 aa12.62□□□□□ -0.39
SHKBP1-218ENST00000598907 DSCAMO60469 2012 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 UPK1AO00322 258 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 AIM2O14862 343 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 OR10H2O60403 315 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 ZFAND5O76080 213 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 PSMG1O95456 288 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 CLPSP04118 112 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 P04436 131 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 IFNA16P05015 189 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 RFPL3SP0C7P2 107 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 NT5EP21589 574 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 UQCRC2P22695 453 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 TIMP3P35625 211 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 CPOXP36551 454 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 PIGAP37287 484 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 GPR143P51810 404 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 GAB1Q13480 694 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 NFYCQ13952 458 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 CAPRIN1Q14444 709 aaKnown RBP12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 TRMT12Q53H54 448 aaKnown RBP12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 RUNDC3AQ59EK9 446 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 WIPI1Q5MNZ9 446 aaPredicted RBP12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 C6orf10Q5SRN2 563 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 C20orf204Q6ZNR8 217 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 DHDDSQ86SQ9 333 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 GALNT12Q8IXK2 581 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 OR2L13Q8N349 312 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 ADCY4Q8NFM4 1077 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 OR7G2Q8NG99 324 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 SFXN5Q8TD22 340 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 ZFP90Q8TF47 636 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 KAT2AQ92830 837 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 SLC7A6OSQ96CW6 309 aaPredicted RBP12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 FAM120BQ96EK7 910 aaKnown RBP12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 CGREF1Q99674 301 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 C1orf21Q9H246 121 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 GID8Q9NWU2 228 aa12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 C19orf53Q9UNZ5 99 aaPredicted RBP12.61□□□□□ -0.39
SHKBP1-218ENST00000598907 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 B2RBV5 119 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 C17orf105B2RV13 164 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 EMC8O43402 210 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 TLX2O43763 284 aaPredicted RBP12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 HNRNPCL1O60812 293 aaKnown RBP12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 ATP5HO75947 161 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 CBX7O95931 251 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 C1QCP02747 245 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 IGKV3-11P04433 115 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 GSNP06396 782 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 ABCB1P08183 1280 aaPredicted RBP12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 KRT16P08779 473 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 FAM157CP0CG43 387 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 CTSSP25774 331 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 GPC1P35052 558 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 MC3RP41968 323 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 CCT3P49368 545 aaKnown RBP12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 NUDT2P50583 147 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 ATP5J2P56134 94 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 MRPS35P82673 323 aaKnown RBP12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 DUSP8Q13202 625 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 HYAL4Q2M3T9 481 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 GTDC1Q4AE62 458 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 TMEM107Q6UX40 140 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 RINLQ6ZS11 566 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 ZNF621Q6ZSS3 439 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 MEIOBQ8N635 442 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 TRIML2Q8N7C3 387 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 MORN4Q8NDC4 146 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 OR14A16Q8NHC5 309 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 NEIL3Q8TAT5 605 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 ZNF721Q8TF20 911 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 MOAP1Q96BY2 351 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 GIMAP5Q96F15 307 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 SENP5Q96HI0 755 aaPredicted RBP12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 FBXL20Q96IG2 436 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 ANKRD27Q96NW4 1050 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 HS3ST6Q96QI5 342 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 HOPXQ9BPY8 73 aaPredicted RBP12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 TAS2R1Q9NYW7 299 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 JKAMPQ9P055 326 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 MYOTQ9UBF9 498 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 CAMK2AQ9UQM7 478 aa12.6□□□□□ -0.39
SHKBP1-218ENST00000598907 TESMINQ9Y4I5 508 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms