RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 CFAP157Q5JU67 520 aa10.82□□□□□ -0.68
SOX2-OT-228ENST00000597828 EMBQ6PCB8 327 aa10.82□□□□□ -0.68
SOX2-OT-228ENST00000597828 STAC2Q6ZMT1 411 aa10.82□□□□□ -0.68
SOX2-OT-228ENST00000597828 ZNF704Q6ZNC4 412 aaPredicted RBP10.82□□□□□ -0.68
SOX2-OT-228ENST00000597828 C20orf204Q6ZNR8 217 aa10.82□□□□□ -0.68
SOX2-OT-228ENST00000597828 Q6ZSR9 355 aa10.82□□□□□ -0.68
SOX2-OT-228ENST00000597828 CCDC63Q8NA47 563 aa10.82□□□□□ -0.68
SOX2-OT-228ENST00000597828 EPS8L3Q8TE67 593 aaKnown RBP10.82□□□□□ -0.68
SOX2-OT-228ENST00000597828 NUDT8Q8WV74 236 aa10.82□□□□□ -0.68
SOX2-OT-228ENST00000597828 IGFBPL1Q8WX77 278 aa10.82□□□□□ -0.68
SOX2-OT-228ENST00000597828 PPCDCQ96CD2 204 aa10.82□□□□□ -0.68
SOX2-OT-228ENST00000597828 FCRL1Q96LA6 429 aa10.82□□□□□ -0.68
SOX2-OT-228ENST00000597828 MS4A4EQ96PG1 132 aa10.82□□□□□ -0.68
SOX2-OT-228ENST00000597828 REEP4Q9H6H4 257 aa10.82□□□□□ -0.68
SOX2-OT-228ENST00000597828 MED17Q9NVC6 651 aa10.82□□□□□ -0.68
SOX2-OT-228ENST00000597828 OXSMQ9NWU1 459 aa10.82□□□□□ -0.68
SOX2-OT-228ENST00000597828 C1orf109Q9NX04 203 aa10.82□□□□□ -0.68
SOX2-OT-228ENST00000597828 SH3BP4Q9P0V3 963 aa10.82□□□□□ -0.68
SOX2-OT-228ENST00000597828 EMC9Q9Y3B6 208 aa10.82□□□□□ -0.68
SOX2-OT-228ENST00000597828 PLCE1Q9P212 2302 aa10.82□□□□□ -0.68
SOX2-OT-228ENST00000597828 KIAA1324LA8MWY0 1029 aaPredicted RBP10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 IFI6P09912 130 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 LINC00032P0C843 101 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 AGTR1P30556 359 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 SFTPDP35247 375 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 FRKP42685 505 aaPredicted RBP10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 PRIM2P49643 509 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 NR1H2P55055 460 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 CTBP2P56545 445 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 DNAJB13P59910 316 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 FOXF1Q12946 379 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 PDE7AQ13946 482 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 FGFBP1Q14512 234 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 GALNTL6Q49A17 601 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 RFTN2Q52LD8 501 aaPredicted RBP10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 ALKBH2Q6NS38 261 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 MFSD12Q6NUT3 480 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 LSRQ86X29 649 aaPredicted RBP10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 C10orf107Q8IVU9 208 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 CNPY4Q8N129 248 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 C4orf33Q8N1A6 199 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 GTPBP8Q8N3Z3 284 aaPredicted RBP10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 CDRT4Q8N9R6 151 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 OR2V1Q8NHB1 315 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 FAM110BQ8TC76 370 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 ROBO4Q8WZ75 1007 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 JADE3Q92613 823 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 CAVIN3Q969G5 261 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 PLPPR2Q96GM1 343 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 GMPPAQ96IJ6 420 aaPredicted RBP10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 CCT7Q99832 543 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 SRXN1Q9BYN0 137 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 ACTR6Q9GZN1 396 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 PLSCR4Q9NRQ2 329 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 SIRT3Q9NTG7 399 aaPredicted RBP10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 ARGLU1Q9NWB6 273 aaPredicted RBP10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 GIN1Q9NXP7 522 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 HIVEP2P31629 2446 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 JMJD1CQ15652 2540 aa10.81□□□□□ -0.68
SOX2-OT-228ENST00000597828 SONP18583 2426 aaKnown RBP10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 ALPK2Q86TB3 2170 aa10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 INAFM1C9JVW0 142 aa10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 SLC28A1O00337 649 aa10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 AZIN1O14977 448 aa10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 LSM1O15116 133 aaKnown RBP10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 RGS14O43566 566 aa10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 CNOT4O95628 575 aaKnown RBP10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 CHRNGP07510 517 aa10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 CPA3P15088 417 aa10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 ZNF41P51814 821 aaPredicted RBP10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 MANFP55145 182 aaKnown RBP10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 OCRLQ01968 901 aa10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 ZNF117Q03924 483 aa10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 IFFO1Q0D2I5 559 aa10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 NDUFAF6Q330K2 333 aa10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 CCDC153Q494R4 210 aa10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 BEX5Q5H9J7 111 aa10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 EXOSC6Q5RKV6 272 aaKnown RBP10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 LIPMQ5VYY2 423 aa10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 HBMQ6B0K9 141 aa10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 PRSS57Q6UWY2 283 aa10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 PLEKHM3Q6ZWE6 761 aa10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 ATG4DQ86TL0 474 aaPredicted RBP10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 WDR75Q8IWA0 830 aaKnown RBP10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 COX18Q8N8Q8 333 aa10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 ZFP28Q8NHY6 868 aa10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 RAB3IL1Q8TBN0 382 aa10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 AENQ8WTP8 325 aaKnown RBP10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 ABHD3Q8WU67 409 aa10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 CDS1Q92903 461 aa10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 FAM120BQ96EK7 910 aaKnown RBP10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 ZNF764Q96H86 408 aaPredicted RBP10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 BDH2Q9BUT1 245 aa10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 GATA5Q9BWX5 397 aaPredicted RBP10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 GSX2Q9BZM3 304 aa10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 NTMQ9P121 344 aa10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 MCTS1Q9ULC4 181 aaKnown RBP10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 WBP11Q9Y2W2 641 aaKnown RBP10.8□□□□□ -0.68
SOX2-OT-228ENST00000597828 A0A087WZY1 265 aa10.79□□□□□ -0.68
SOX2-OT-228ENST00000597828 C7orf72A4D263 438 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms