RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 ZNF169Q14929 603 aaPredicted RBP13.88□□□□□ -0.19
ATG4D-211ENST00000589753 CD226Q15762 336 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 CYBRD1Q53TN4 286 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 RNF220Q5VTB9 566 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 FNDC7Q5VTL7 733 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 DHRS4L2Q6PKH6 230 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 Q6ZS92 163 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 EIF3MQ7L2H7 374 aaKnown RBP13.88□□□□□ -0.19
ATG4D-211ENST00000589753 GALNTL5Q7Z4T8 443 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 PACS2Q86VP3 889 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 DHFR2Q86XF0 187 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 SULF2Q8IWU5 870 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 CMIPQ8IY22 773 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 RBMXL3Q8N7X1 1067 aaKnown RBP13.88□□□□□ -0.19
ATG4D-211ENST00000589753 EXD3Q8N9H8 876 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 SMYD1Q8NB12 490 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 BHLHE22Q8NFJ8 381 aaPredicted RBP13.88□□□□□ -0.19
ATG4D-211ENST00000589753 NTNG2Q96CW9 530 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 NSMCE2Q96MF7 247 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 FRMD6Q96NE9 622 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 FAM173AQ9BQD7 235 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 PINK1Q9BXM7 581 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 ARMC7Q9H6L4 198 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 HHATLQ9HCP6 504 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 DEPPQ9NTK1 212 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 ADPRHL2Q9NX46 363 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 PPP4R1LQ9P1A2 415 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 SLC35A3Q9Y2D2 325 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 A0A0G2JMM0 328 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 A0A1W2PPB8 328 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 A0A1W2PRS3 328 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 CLDN24A6NM45 220 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 KIR3DP1A8MWS1 328 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 KLRC4-KLRK1H3BQV0 150 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 GTPBP1O00178 669 aaKnown RBP13.87□□□□□ -0.19
ATG4D-211ENST00000589753 ACOT8O14734 319 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 PEX1O43933 1283 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 TPST1O60507 370 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 UBL4AP11441 157 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 SFTPCP11686 197 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 ATP6V1B2P21281 511 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 KCNJ5P48544 419 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 MASP1P48740 699 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 EEF1A1P68104 462 aaKnown RBP13.87□□□□□ -0.19
ATG4D-211ENST00000589753 C17orf67Q0P5P2 114 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 ZSWIM7Q19AV6 140 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 EIPR1Q53HC9 387 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 MRPL2Q5T653 305 aaKnown RBP13.87□□□□□ -0.19
ATG4D-211ENST00000589753 LCN8Q6JVE9 175 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 CYP2R1Q6VVX0 501 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 CBLL1Q75N03 491 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 SPPL2CQ8IUH8 684 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 OR2M7Q8NG81 312 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 OR52E4Q8NGH9 312 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 DUSP19Q8WTR2 217 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 UTP4Q969X6 686 aaKnown RBP13.87□□□□□ -0.19
ATG4D-211ENST00000589753 TMEM41AQ96HV5 264 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 RNF145Q96MT1 663 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 RSPO3Q9BXY4 272 aaPredicted RBP13.87□□□□□ -0.19
ATG4D-211ENST00000589753 MFRPQ9BY79 579 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 RPS6KA6Q9UK32 745 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 SLC13A4Q9UKG4 626 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 POMPQ9Y244 141 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 B3GNT3Q9Y2A9 372 aa13.87□□□□□ -0.19
ATG4D-211ENST00000589753 CDHR4A6H8M9 788 aa13.86□□□□□ -0.19
ATG4D-211ENST00000589753 GNB5O14775 395 aa13.86□□□□□ -0.19
ATG4D-211ENST00000589753 ZNF264O43296 627 aa13.86□□□□□ -0.19
ATG4D-211ENST00000589753 SUV39H1O43463 412 aa13.86□□□□□ -0.19
ATG4D-211ENST00000589753 TRIM3O75382 744 aaPredicted RBP13.86□□□□□ -0.19
ATG4D-211ENST00000589753 CIB2O75838 187 aa13.86□□□□□ -0.19
ATG4D-211ENST00000589753 ZNF682O95780 498 aa13.86□□□□□ -0.19
ATG4D-211ENST00000589753 UBTFL6P0CB48 400 aaPredicted RBP13.86□□□□□ -0.19
ATG4D-211ENST00000589753 CD247P20963 164 aa13.86□□□□□ -0.19
ATG4D-211ENST00000589753 SELENOWP63302 87 aa13.86□□□□□ -0.19
ATG4D-211ENST00000589753 FLOT2Q14254 428 aa13.86□□□□□ -0.19
ATG4D-211ENST00000589753 DUSP7Q16829 419 aa13.86□□□□□ -0.19
ATG4D-211ENST00000589753 GLIPR1L2Q4G1C9 344 aa13.86□□□□□ -0.19
ATG4D-211ENST00000589753 MTX3Q5HYI7 312 aa13.86□□□□□ -0.19
ATG4D-211ENST00000589753 EID3Q8N140 333 aa13.86□□□□□ -0.19
ATG4D-211ENST00000589753 CLIP4Q8N3C7 705 aa13.86□□□□□ -0.19
ATG4D-211ENST00000589753 FAM98AQ8NCA5 519 aaKnown RBP13.86□□□□□ -0.19
ATG4D-211ENST00000589753 LZICQ8WZA0 190 aa13.86□□□□□ -0.19
ATG4D-211ENST00000589753 TPD52L3Q96J77 140 aa13.86□□□□□ -0.19
ATG4D-211ENST00000589753 ZNF597Q96LX8 424 aa13.86□□□□□ -0.19
ATG4D-211ENST00000589753 LRGUKQ96M69 825 aa13.86□□□□□ -0.19
ATG4D-211ENST00000589753 JSRP1Q96MG2 331 aaPredicted RBP13.86□□□□□ -0.19
ATG4D-211ENST00000589753 RAB3IPQ96QF0 476 aaPredicted RBP13.86□□□□□ -0.19
ATG4D-211ENST00000589753 TRIM15Q9C019 465 aa13.86□□□□□ -0.19
ATG4D-211ENST00000589753 SLC25A18Q9H1K4 315 aa13.86□□□□□ -0.19
ATG4D-211ENST00000589753 DCAF13Q9NV06 445 aaKnown RBP13.86□□□□□ -0.19
ATG4D-211ENST00000589753 RLIMQ9NVW2 624 aa13.86□□□□□ -0.19
ATG4D-211ENST00000589753 KLHL28Q9NXS3 571 aa13.86□□□□□ -0.19
ATG4D-211ENST00000589753 TUBA8Q9NY65 449 aaPredicted RBP13.86□□□□□ -0.19
ATG4D-211ENST00000589753 BAG5Q9UL15 447 aa13.86□□□□□ -0.19
ATG4D-211ENST00000589753 BOKQ9UMX3 212 aaPredicted RBP13.86□□□□□ -0.19
ATG4D-211ENST00000589753 SAMD4AQ9UPU9 718 aaKnown RBP13.86□□□□□ -0.19
ATG4D-211ENST00000589753 CARD8Q9Y2G2 431 aa13.86□□□□□ -0.19
ATG4D-211ENST00000589753 CHST2Q9Y4C5 530 aa13.86□□□□□ -0.19
ATG4D-211ENST00000589753 IGLV3-32A0A0A0MS00 114 aa13.85□□□□□ -0.19
ATG4D-211ENST00000589753 PINLYPA6NC86 204 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms