RNA–Protein interactions for RNA: ENST00000584538.1

USP22-211, Transcript of ubiquitin specific peptidase 22, human

TSL 4

Gene USP22, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP22-211	ENST00000584538	NHSL2	Q5HYW2	709 aa		10.77	□□□□□ -0.69
USP22-211	ENST00000584538	EMC4	Q5J8M3	183 aa		10.77	□□□□□ -0.69
USP22-211	ENST00000584538	WIPI1	Q5MNZ9	446 aa	Predicted RBP	10.77	□□□□□ -0.69
USP22-211	ENST00000584538	GCNT6	Q5T4J0	391 aa		10.77	□□□□□ -0.69
USP22-211	ENST00000584538	CBLN3	Q6UW01	205 aa		10.77	□□□□□ -0.69
USP22-211	ENST00000584538	MTERF4	Q7Z6M4	381 aa	Known RBP	10.77	□□□□□ -0.69
USP22-211	ENST00000584538	HMGN2P46	Q86SG4	172 aa		10.77	□□□□□ -0.69
USP22-211	ENST00000584538	YRDC	Q86U90	279 aa	Known RBP	10.77	□□□□□ -0.69
USP22-211	ENST00000584538	MISP	Q8IVT2	679 aa		10.77	□□□□□ -0.69
USP22-211	ENST00000584538	ANKS4B	Q8N8V4	417 aa		10.77	□□□□□ -0.69
USP22-211	ENST00000584538	OR4K17	Q8NGC6	315 aa		10.77	□□□□□ -0.69
USP22-211	ENST00000584538	RP9	Q8TA86	221 aa	Known RBP	10.77	□□□□□ -0.69
USP22-211	ENST00000584538	NEIL3	Q8TAT5	605 aa		10.77	□□□□□ -0.69
USP22-211	ENST00000584538	FAM57A	Q8TBR7	257 aa		10.77	□□□□□ -0.69
USP22-211	ENST00000584538	SLC38A5	Q8WUX1	472 aa		10.77	□□□□□ -0.69
USP22-211	ENST00000584538	MAL2	Q969L2	176 aa		10.77	□□□□□ -0.69
USP22-211	ENST00000584538	ZNF524	Q96C55	264 aa		10.77	□□□□□ -0.69
USP22-211	ENST00000584538	ZG16B	Q96DA0	208 aa		10.77	□□□□□ -0.69
USP22-211	ENST00000584538	C1GALT1C1	Q96EU7	318 aa		10.77	□□□□□ -0.69
USP22-211	ENST00000584538	NPAS1	Q99742	590 aa		10.77	□□□□□ -0.69
USP22-211	ENST00000584538	HOXD1	Q9GZZ0	328 aa		10.77	□□□□□ -0.69
USP22-211	ENST00000584538	DSN1	Q9H410	356 aa		10.77	□□□□□ -0.69
USP22-211	ENST00000584538	MED11	Q9P086	117 aa		10.77	□□□□□ -0.69
USP22-211	ENST00000584538	SUCO	Q9UBS9	1254 aa	Known RBP	10.77	□□□□□ -0.69
USP22-211	ENST00000584538	ICAM5	Q9UMF0	924 aa		10.77	□□□□□ -0.69
USP22-211	ENST00000584538	MRPS18C	Q9Y3D5	142 aa	Known RBP	10.77	□□□□□ -0.69
USP22-211	ENST00000584538	MED12	Q93074	2177 aa		10.77	□□□□□ -0.69
USP22-211	ENST00000584538	PHF3	Q92576	2039 aa	Known RBP	10.77	□□□□□ -0.69
USP22-211	ENST00000584538	TRGV5	A0A0B4J1U4	118 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	AGAP5	A6NIR3	686 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	CLDN24	A6NM45	220 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	RNF224	P0DH78	156 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	PRDX6	P30041	224 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	PGM1	P36871	562 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	ADH7	P40394	386 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	CA7	P43166	264 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	CRISP3	P54108	245 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	HPCA	P84074	193 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	C17orf67	Q0P5P2	114 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	CYLC2	Q14093	348 aa	Predicted RBP	10.76	□□□□□ -0.69
USP22-211	ENST00000584538	GANAB	Q14697	944 aa	Known RBP	10.76	□□□□□ -0.69
USP22-211	ENST00000584538	SLC10A1	Q14973	349 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	C3AR1	Q16581	482 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	ZNF630	Q2M218	657 aa	Predicted RBP	10.76	□□□□□ -0.69
USP22-211	ENST00000584538	EIF2S3L	Q2VIR3	472 aa	Known RBP	10.76	□□□□□ -0.69
USP22-211	ENST00000584538	PLPPR5	Q32ZL2	321 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	RABL3	Q5HYI8	236 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	PRAMEF8	Q5VWM4	474 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	PRAMEF7	Q5VXH5	474 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	ARHGAP11A	Q6P4F7	1023 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	ARSK	Q6UWY0	536 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	CALHM3	Q86XJ0	350 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	ZZZ3	Q8IYH5	903 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	ZNF527	Q8NB42	609 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	OR8J3	Q8NGG0	315 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	DUSP19	Q8WTR2	217 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	LRRC58	Q96CX6	371 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	ARSG	Q96EG1	525 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	TREX2	Q9BQ50	279 aa	Predicted RBP	10.76	□□□□□ -0.69
USP22-211	ENST00000584538	GPATCH1	Q9BRR8	931 aa	Known RBP	10.76	□□□□□ -0.69
USP22-211	ENST00000584538	UGT2B28	Q9BY64	529 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	TMEM38A	Q9H6F2	299 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	KAT8	Q9H7Z6	458 aa	Known RBP	10.76	□□□□□ -0.69
USP22-211	ENST00000584538	BCL2L10	Q9HD36	194 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	SDHAF3	Q9NRP4	125 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	THUMPD1	Q9NXG2	353 aa	Known RBP	10.76	□□□□□ -0.69
USP22-211	ENST00000584538	TNFRSF10D	Q9UBN6	386 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	TINAG	Q9UJW2	476 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	DKKL1	Q9UK85	242 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	CORO2B	Q9UQ03	480 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	OSGIN2	Q9Y236	505 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	SLC6A5	Q9Y345	797 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	CHST2	Q9Y4C5	530 aa		10.76	□□□□□ -0.69
USP22-211	ENST00000584538	LOC100653049	A0A140TA62	436 aa		10.75	□□□□□ -0.69
USP22-211	ENST00000584538	C7orf72	A4D263	438 aa		10.75	□□□□□ -0.69
USP22-211	ENST00000584538	OR14I1	A6ND48	311 aa		10.75	□□□□□ -0.69
USP22-211	ENST00000584538	ETV2	O00321	342 aa	Predicted RBP	10.75	□□□□□ -0.69
USP22-211	ENST00000584538	ADAM11	O75078	769 aa		10.75	□□□□□ -0.69
USP22-211	ENST00000584538	KRT34	O76011	436 aa		10.75	□□□□□ -0.69
USP22-211	ENST00000584538	NR2F1	P10589	423 aa		10.75	□□□□□ -0.69
USP22-211	ENST00000584538	UBL4A	P11441	157 aa		10.75	□□□□□ -0.69
USP22-211	ENST00000584538	SLC6A2	P23975	617 aa		10.75	□□□□□ -0.69
USP22-211	ENST00000584538	PSMA4	P25789	261 aa	Known RBP	10.75	□□□□□ -0.69
USP22-211	ENST00000584538	DPP4	P27487	766 aa		10.75	□□□□□ -0.69
USP22-211	ENST00000584538	PTGS2	P35354	604 aa		10.75	□□□□□ -0.69
USP22-211	ENST00000584538	CLK3	P49761	638 aa	Known RBP	10.75	□□□□□ -0.69
USP22-211	ENST00000584538	SUMO3	P55854	103 aa	Predicted RBP	10.75	□□□□□ -0.69
USP22-211	ENST00000584538	DSCR4	P56555	118 aa	Predicted RBP	10.75	□□□□□ -0.69
USP22-211	ENST00000584538	PCBP3	P57721	371 aa	Known RBP	10.75	□□□□□ -0.69
USP22-211	ENST00000584538	C1QL3	Q5VWW1	255 aa		10.75	□□□□□ -0.69
USP22-211	ENST00000584538	NANOGP8	Q6NSW7	305 aa		10.75	□□□□□ -0.69
USP22-211	ENST00000584538	ZNF836	Q6ZNA1	936 aa		10.75	□□□□□ -0.69
USP22-211	ENST00000584538	CD163	Q86VB7	1156 aa		10.75	□□□□□ -0.69
USP22-211	ENST00000584538	ZNF614	Q8N883	585 aa		10.75	□□□□□ -0.69
USP22-211	ENST00000584538	TOR1AIP2	Q8NFQ8	470 aa		10.75	□□□□□ -0.69
USP22-211	ENST00000584538	B4GALNT2	Q8NHY0	566 aa		10.75	□□□□□ -0.69
USP22-211	ENST00000584538	NFKBID	Q8NI38	313 aa		10.75	□□□□□ -0.69
USP22-211	ENST00000584538	BBS10	Q8TAM1	723 aa		10.75	□□□□□ -0.69
USP22-211	ENST00000584538	POC1B	Q8TC44	478 aa		10.75	□□□□□ -0.69
USP22-211	ENST00000584538	PHOSPHO1	Q8TCT1	267 aa		10.75	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms