RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 SMIM10Q96HG1 83 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 SLC35G5Q96KT7 338 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 C20orf173Q96LM9 149 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 AMDHD1Q96NU7 426 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 AICDAQ9GZX7 198 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 SEMA6AQ9H2E6 1030 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 GLIPR2Q9H4G4 154 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 ZCCHC3Q9NUD5 404 aaKnown RBP9.47□□□□□ -0.89
SS18-221ENST00000582448 DHCR7Q9UBM7 475 aaKnown RBP9.47□□□□□ -0.89
SS18-221ENST00000582448 DAPP1Q9UN19 280 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 LRCH1Q9Y2L9 728 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 PCSK5Q92824 1860 aa9.47□□□□□ -0.89
SS18-221ENST00000582448 C4orf51C9J302 202 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 CLDN4O14493 209 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 PGRMC2O15173 223 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 CLOCKO15516 846 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 EMC8O43402 210 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 OR2B3O76000 313 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 PRKD3O94806 890 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 AGR2O95994 175 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 CST1P01037 141 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 RNH1P13489 461 aaKnown RBP9.46□□□□□ -0.9
SS18-221ENST00000582448 FEN1P39748 380 aaKnown RBP9.46□□□□□ -0.9
SS18-221ENST00000582448 XKP51811 444 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 RAB38P57729 211 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 CDK6Q00534 326 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 C18orf63Q68DL7 685 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 ZBTB49Q6ZSB9 765 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 CLEC4FQ8N1N0 589 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 C7orf57Q8NEG2 295 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 C1orf159Q96HA4 380 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 VPS50Q96JG6 964 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 BTBD9Q96Q07 612 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 ZNF607Q96SK3 696 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 WDR77Q9BQA1 342 aaPredicted RBP9.46□□□□□ -0.9
SS18-221ENST00000582448 SPATA5L1Q9BVQ7 753 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 ZCCHC4Q9H5U6 513 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 TRIM45Q9H8W5 580 aaPredicted RBP9.46□□□□□ -0.9
SS18-221ENST00000582448 CACYBPQ9HB71 228 aaKnown RBP9.46□□□□□ -0.9
SS18-221ENST00000582448 FAM60AQ9NP50 221 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 A4GALTQ9NPC4 353 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 TRPC4Q9UBN4 977 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 DNAJB9Q9UBS3 223 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 FBXL7Q9UJT9 491 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 CES1P1Q9UKY3 287 aa9.46□□□□□ -0.9
SS18-221ENST00000582448 A0A1B0GUH1 482 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 HYKKA2RU49 373 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 ZNF860A6NHJ4 632 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 C22orf46C9J442 243 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 CNOT3O75175 753 aaKnown RBP9.45□□□□□ -0.9
SS18-221ENST00000582448 E2F6O75461 281 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 C8orf89P0DMQ9 161 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 PORP16435 677 aaPredicted RBP9.45□□□□□ -0.9
SS18-221ENST00000582448 ZNF23P17027 643 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 ITGA2P17301 1181 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 FPR2P25090 351 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 CDK9P50750 372 aaKnown RBP9.45□□□□□ -0.9
SS18-221ENST00000582448 PRKAG1P54619 331 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 AIMP2Q13155 320 aaKnown RBP9.45□□□□□ -0.9
SS18-221ENST00000582448 MED21Q13503 144 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 RUNX2Q13950 521 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 FAM53BQ14153 422 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 ADRM1Q16186 407 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 ATAD3BQ5T9A4 648 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 AGAP7PQ5VUJ5 663 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 REEP3Q6NUK4 255 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 FAM180BQ6P0A1 224 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 ENPP6Q6UWR7 440 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 EIF3MQ7L2H7 374 aaKnown RBP9.45□□□□□ -0.9
SS18-221ENST00000582448 PPP1R32Q7Z5V6 425 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 AMIGO2Q86SJ2 522 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 KRT73Q86Y46 540 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 PTOV1Q86YD1 416 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 GALNT4Q8N4A0 578 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 OR2Y1Q8NGV0 311 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 NFKBIDQ8NI38 313 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 FAR1Q8WVX9 515 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 RASSF5Q8WWW0 418 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 DIO2Q92813 273 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 TPD52L3Q96J77 140 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 MAGED4Q96JG8 741 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 AGAP4Q96P64 663 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 BARD1Q99728 777 aaKnown RBP9.45□□□□□ -0.9
SS18-221ENST00000582448 CIB1Q99828 191 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 NDC1Q9BTX1 674 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 SYNPO2LQ9H987 977 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 DDX18Q9NVP1 670 aaKnown RBP9.45□□□□□ -0.9
SS18-221ENST00000582448 KCMF1Q9P0J7 381 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 PTGFRNQ9P2B2 879 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 P2RX2Q9UBL9 471 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 RAB26Q9ULW5 256 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 CDC14AQ9UNH5 594 aa9.45□□□□□ -0.9
SS18-221ENST00000582448 DIDO1Q9BTC0 2240 aaKnown RBP9.44□□□□□ -0.9
SS18-221ENST00000582448 SAC3D1A6NKF1 404 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 DUXAA6NLW8 204 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 SGK494L7N484 410 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 HCRTR1O43613 425 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 OR10H2O60403 315 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 RDH16O75452 317 aa9.44□□□□□ -0.9
SS18-221ENST00000582448 JRKO75564 520 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms