RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 ZNF550Q7Z398 422 aa11.3□□□□□ -0.6
ERBB2-206ENST00000578373 THAP6Q8TBB0 222 aa11.3□□□□□ -0.6
ERBB2-206ENST00000578373 ADAMTS19Q8TE59 1207 aa11.3□□□□□ -0.6
ERBB2-206ENST00000578373 CCDC107Q8WV48 283 aa11.3□□□□□ -0.6
ERBB2-206ENST00000578373 FGF13Q92913 245 aa11.3□□□□□ -0.6
ERBB2-206ENST00000578373 TRMT2BQ96GJ1 504 aaKnown RBP11.3□□□□□ -0.6
ERBB2-206ENST00000578373 DUSP21Q9H596 190 aa11.3□□□□□ -0.6
ERBB2-206ENST00000578373 CWH43Q9H720 699 aa11.3□□□□□ -0.6
ERBB2-206ENST00000578373 ATG4BQ9Y4P1 393 aa11.3□□□□□ -0.6
ERBB2-206ENST00000578373 ZNF726A6NNF4 738 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 GABRPO00591 440 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 ADH1BP00325 375 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 ELAVL4P26378 380 aaKnown RBP11.29□□□□□ -0.6
ERBB2-206ENST00000578373 EIF2DP41214 584 aaKnown RBP11.29□□□□□ -0.6
ERBB2-206ENST00000578373 OR5M10Q6IEU7 315 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 CYHR1Q6ZMK1 362 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 MS4A15Q8N5U1 240 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 HYLS1Q96M11 299 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 GLIPR2Q9H4G4 154 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 FOLH1BQ9HBA9 442 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 GALNT9Q9HCQ5 603 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 WSB2Q9NYS7 404 aaPredicted RBP11.29□□□□□ -0.6
ERBB2-206ENST00000578373 HSFX1Q9UBD0 423 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 TCRBV21S2A2A0A5A6 115 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 METTL21EPA6NDL7 271 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 ACOD1A6NK06 481 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 FAM155AB1AL88 458 aaPredicted RBP11.29□□□□□ -0.6
ERBB2-206ENST00000578373 ARPC1BO15143 372 aaKnown RBP11.29□□□□□ -0.6
ERBB2-206ENST00000578373 PIP5K1CO60331 668 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 CSO75390 466 aaKnown RBP11.29□□□□□ -0.6
ERBB2-206ENST00000578373 FUT1P19526 365 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 ITGB7P26010 798 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 RAB40BQ12829 278 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 OXA1LQ15070 435 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 MCEMP1Q8IX19 187 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 SLC16A11Q8NCK7 471 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 CREB3L1Q96BA8 519 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 TAS2R3Q9NYW6 316 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 EEF1E1-BLOC1S5C9J1V9 151 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 CYB5AP00167 134 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 MMP11P24347 488 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 EVI2BP34910 448 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 MLLT11Q13015 90 aaPredicted RBP11.29□□□□□ -0.6
ERBB2-206ENST00000578373 GGTA1PQ4G0N0 100 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 FBXO42Q6P3S6 717 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 OR6N1Q8NGY5 312 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 SMAP2Q8WU79 429 aaPredicted RBP11.29□□□□□ -0.6
ERBB2-206ENST00000578373 SLC6A17Q9H1V8 727 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 ACER3Q9NUN7 267 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 UBQLN2Q9UHD9 624 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 NDRG4Q9ULP0 352 aaKnown RBP11.29□□□□□ -0.6
ERBB2-206ENST00000578373 DOCK5Q9H7D0 1870 aa11.29□□□□□ -0.6
ERBB2-206ENST00000578373 ZC3H12DA2A288 527 aaKnown RBP11.28□□□□□ -0.6
ERBB2-206ENST00000578373 PLPP1O14494 284 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 GPX5O75715 221 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 ALDOBP05062 364 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 RNH1P13489 461 aaKnown RBP11.28□□□□□ -0.6
ERBB2-206ENST00000578373 RPS15AP62244 130 aaKnown RBP11.28□□□□□ -0.6
ERBB2-206ENST00000578373 PUS10Q3MIT2 529 aaKnown RBP11.28□□□□□ -0.6
ERBB2-206ENST00000578373 PRSS36Q5K4E3 855 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 RLN3Q8WXF3 142 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 HAVCR1Q96D42 359 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 COQ10AQ96MF6 247 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 ZNF559Q9BR84 538 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 SIRT5Q9NXA8 310 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 BABAM2Q9NXR7 383 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 KIAA1217Q5T5P2 1943 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 LOXHD1Q8IVV2 1947 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 H3BNC9 293 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 KIAA0355O15063 1070 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 CREBL2O60519 120 aaPredicted RBP11.28□□□□□ -0.6
ERBB2-206ENST00000578373 SCGNO76038 276 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 CPNE6O95741 557 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 LDOC1O95751 146 aaPredicted RBP11.28□□□□□ -0.6
ERBB2-206ENST00000578373 S1PR1P21453 382 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 GDI2P50395 445 aaKnown RBP11.28□□□□□ -0.6
ERBB2-206ENST00000578373 NRG3P56975 720 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 PGGHGQ32M88 737 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 LRIF1Q5T3J3 769 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 GDPD3Q7L5L3 318 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 ALDH16A1Q8IZ83 802 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 TMEM163Q8TC26 289 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 RANBP3Q9H6Z4 567 aaPredicted RBP11.28□□□□□ -0.6
ERBB2-206ENST00000578373 FER1L6Q2WGJ9 1857 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 A0A1B0GV50 99 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 SPDEFO95238 335 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 JUNDP17535 347 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 S100GP29377 79 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 P2RY2P41231 377 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 SLC1A3P43003 542 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 ACTC1P68032 377 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 ACTA1P68133 377 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 IRF4Q15306 451 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 CDNFQ49AH0 187 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 ACSM5Q6NUN0 579 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 SYT9Q86SS6 491 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 CHTF18Q8WVB6 975 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 MS4A4EQ96PG1 132 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 PINK1Q9BXM7 581 aa11.28□□□□□ -0.6
ERBB2-206ENST00000578373 ZNF350Q9GZX5 532 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms