RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 UBL4AP11441 157 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 ESRRAP11474 423 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 IL7RP16871 459 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 GPX2P18283 190 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 ADH7P40394 386 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 CA7P43166 264 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 P2RX1P51575 399 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 ZNF41P51814 821 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 SYPL1Q16563 259 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 GLYR1Q49A26 553 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 C4orf17Q53FE4 359 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 RUNDC3AQ59EK9 446 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 WIPI1Q5MNZ9 446 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 PRAMEF8Q5VWM4 474 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 PRAMEF7Q5VXH5 474 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 ENPP6Q6UWR7 440 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 FRRS1Q6ZNA5 592 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 EIF3MQ7L2H7 374 aaKnown RBP11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 YRDCQ86U90 279 aaKnown RBP11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 SNX32Q86XE0 403 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 PEX5LQ8IYB4 626 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 PM20D2Q8IYS1 436 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 GATSQ8NAP1 163 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 OR2M3Q8NG83 312 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 CMTM5Q96DZ9 223 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 ANKRD27Q96NW4 1050 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 PIGQQ9BRB3 760 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 SLC6A15Q9H2J7 730 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 TP63Q9H3D4 680 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 ARMC7Q9H6L4 198 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 ARMCX1Q9P291 453 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 ADAM21Q9UKJ8 722 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 SLC35A3Q9Y2D2 325 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 LIPGQ9Y5X9 500 aa11.61□□□□□ -0.55
TRAPPC1-206ENST00000573989 MYO7BQ6PIF6 2116 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 ZNF264O43296 627 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 LRRTM2O43300 516 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 WISP2O76076 250 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 AGFG2O95081 481 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 NUDT14O95848 222 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 CSTAP01040 98 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 DBIP07108 87 aaKnown RBP11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 HOXD4P09016 255 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 TFPTP0C1Z6 253 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 BMP2P12643 396 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 COX4I1P13073 169 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 GABRA1P14867 456 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 CD1EP15812 388 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 HK1P19367 917 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 SUMO3P55854 103 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 CHRNEQ04844 493 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 FUT5Q11128 374 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 ZSWIM7Q19AV6 140 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 GXYLT1Q4G148 440 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 EIPR1Q53HC9 387 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 NHSL2Q5HYW2 709 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 GCNT6Q5T4J0 391 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 GKAP1Q5VSY0 366 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 RAET1LQ5VY80 246 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 REP15Q6BDI9 236 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 PIGWQ7Z7B1 504 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 CD163Q86VB7 1156 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 RETREG3Q86VR2 466 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 MSRB3Q8IXL7 192 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 CMIPQ8IY22 773 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 FAM26EQ8N5C1 309 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 TMCO5AQ8N6Q1 288 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 ANKFN1Q8N957 763 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 TOR1AIP2Q8NFQ8 470 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 SLC38A5Q8WUX1 472 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 ABTB1Q969K4 478 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 ZBTB8AQ96BR9 441 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 LRRC58Q96CX6 371 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 C1GALT1C1Q96EU7 318 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 SH3YL1Q96HL8 342 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 SFXN2Q96NB2 322 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 CCT8L2Q96SF2 557 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 CCDC106Q9BWC9 280 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 RTN4RQ9BZR6 473 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 SLC38A1Q9H2H9 487 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 A4GALTQ9NPC4 353 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 SH3BGRL2Q9UJC5 107 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 ZNF232Q9UNY5 417 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 IFT52Q9Y366 437 aa11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 DIDO1Q9BTC0 2240 aaKnown RBP11.6□□□□□ -0.55
TRAPPC1-206ENST00000573989 HEATR5AQ86XA9 2040 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 PRAMEF27A3QJZ7 478 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 AGAP5A6NIR3 686 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 CCL21O00585 134 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 FBP2O00757 339 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 ADAM10O14672 748 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 GMFGO60234 142 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 WDR1O75083 606 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 TNFRSF21O75509 655 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 FAM107AO95990 144 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 C1QCP02747 245 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 CHRM4P08173 479 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 SLC6A2P23975 617 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 CHMP24386 653 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms