RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 NGFRP08138 427 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 IL11P20809 199 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 PRPS1L1P21108 318 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 BGNP21810 368 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 ZNF41P51814 821 aaPredicted RBP12.36□□□□□ -0.43
RAB40B-204ENST00000571554 EEFSECP57772 596 aaKnown RBP12.36□□□□□ -0.43
RAB40B-204ENST00000571554 RPS3AP61247 264 aaKnown RBP12.36□□□□□ -0.43
RAB40B-204ENST00000571554 HBA1P69905 142 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 ZNF117Q03924 483 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 MPP2Q14168 576 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 PLPPR5Q32ZL2 321 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 DCST2Q5T1A1 773 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 OR4F3Q6IEY1 312 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 OR2A2Q6IF42 318 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 ZCCHC12Q6PEW1 402 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 ZNF474Q6S9Z5 364 aaPredicted RBP12.36□□□□□ -0.43
RAB40B-204ENST00000571554 OLIG3Q7RTU3 272 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 RIMKLAQ8IXN7 391 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 METTL25Q8N6Q8 603 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 ZNF614Q8N883 585 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 OR56A1Q8NGH5 318 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 B4GALNT2Q8NHY0 566 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 PHOSPHO1Q8TCT1 267 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 ADAMTS15Q8TE58 950 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 COQ8BQ96D53 544 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 ARSGQ96EG1 525 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 ZIM3Q96PE6 472 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 PRPF18Q99633 342 aaKnown RBP12.36□□□□□ -0.43
RAB40B-204ENST00000571554 PAIP2Q9BPZ3 127 aaKnown RBP12.36□□□□□ -0.43
RAB40B-204ENST00000571554 ACTRT3Q9BYD9 372 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 PRRG4Q9BZD6 226 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 PIGUQ9H490 435 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 AKTIPQ9H8T0 292 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 RNF122Q9H9V4 155 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 DUSP22Q9NRW4 184 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 GPATCH2Q9NW75 528 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 KLHL28Q9NXS3 571 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 FAF1Q9UNN5 650 aaPredicted RBP12.36□□□□□ -0.43
RAB40B-204ENST00000571554 ABCA4P78363 2273 aa12.36□□□□□ -0.43
RAB40B-204ENST00000571554 A0A1W2PPR1 153 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 LINC01387J3KSC0 135 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 TNFSF11O14788 317 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 MSTNO14793 375 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 CXCL13O43927 109 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 ZNF500O60304 480 aaPredicted RBP12.35□□□□□ -0.43
RAB40B-204ENST00000571554 NUDT14O95848 222 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 CD1EP15812 388 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 ATP6V1C1P21283 382 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 DNASE1P24855 282 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 SHC1P29353 583 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 KCNJ5P48544 419 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 SLC1A6P48664 564 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 EMX2Q04743 252 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 FOXF1Q12946 379 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 EXOC3L2Q2M3D2 409 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 LSM12Q3MHD2 195 aaKnown RBP12.35□□□□□ -0.43
RAB40B-204ENST00000571554 GLYR1Q49A26 553 aaPredicted RBP12.35□□□□□ -0.43
RAB40B-204ENST00000571554 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.35□□□□□ -0.43
RAB40B-204ENST00000571554 CBLN3Q6UW01 205 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 ZNF550Q7Z398 422 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 ANKRD46Q86W74 232 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 GTPBP8Q8N3Z3 284 aaPredicted RBP12.35□□□□□ -0.43
RAB40B-204ENST00000571554 ANKRD42Q8N9B4 389 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 ZNF610Q8N9Z0 462 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 OR10D3Q8NH80 312 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 RFWD2Q8NHY2 731 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 PSMA8Q8TAA3 256 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 POC1BQ8TC44 478 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 DACH2Q96NX9 599 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 OR7D2Q96RA2 312 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 STACQ99469 402 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 SORT1Q99523 831 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 BHLHE41Q9C0J9 482 aaPredicted RBP12.35□□□□□ -0.43
RAB40B-204ENST00000571554 SERHL2Q9H4I8 314 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 NOP53Q9NZM5 478 aaKnown RBP12.35□□□□□ -0.43
RAB40B-204ENST00000571554 C6orf203Q9P0P8 240 aaPredicted RBP12.35□□□□□ -0.43
RAB40B-204ENST00000571554 CARD8Q9Y2G2 431 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 ZNF175Q9Y473 711 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 ITPR3Q14573 2671 aa12.35□□□□□ -0.43
RAB40B-204ENST00000571554 MAP1AP78559 2803 aaPredicted RBP12.34□□□□□ -0.43
RAB40B-204ENST00000571554 A0A087WZY1 265 aa12.34□□□□□ -0.43
RAB40B-204ENST00000571554 UQCRHLA0A096LP55 91 aa12.34□□□□□ -0.43
RAB40B-204ENST00000571554 HRGP04196 525 aa12.34□□□□□ -0.43
RAB40B-204ENST00000571554 CRHP06850 196 aa12.34□□□□□ -0.43
RAB40B-204ENST00000571554 POU2F1P14859 743 aa12.34□□□□□ -0.43
RAB40B-204ENST00000571554 ZNF17P17021 662 aa12.34□□□□□ -0.43
RAB40B-204ENST00000571554 PSMA4P25789 261 aaKnown RBP12.34□□□□□ -0.43
RAB40B-204ENST00000571554 CCKARP32238 428 aa12.34□□□□□ -0.43
RAB40B-204ENST00000571554 SFTPDP35247 375 aa12.34□□□□□ -0.43
RAB40B-204ENST00000571554 CD79BP40259 229 aa12.34□□□□□ -0.43
RAB40B-204ENST00000571554 NME5P56597 212 aa12.34□□□□□ -0.43
RAB40B-204ENST00000571554 CLDN8P56748 225 aa12.34□□□□□ -0.43
RAB40B-204ENST00000571554 MAD2L1Q13257 205 aaPredicted RBP12.34□□□□□ -0.43
RAB40B-204ENST00000571554 CTU2Q2VPK5 515 aaKnown RBP12.34□□□□□ -0.43
RAB40B-204ENST00000571554 ANKRD34AQ69YU3 496 aa12.34□□□□□ -0.43
RAB40B-204ENST00000571554 PAMR1Q6UXH9 720 aa12.34□□□□□ -0.43
RAB40B-204ENST00000571554 WDR75Q8IWA0 830 aaKnown RBP12.34□□□□□ -0.43
RAB40B-204ENST00000571554 HOMEZQ8IX15 550 aa12.34□□□□□ -0.43
RAB40B-204ENST00000571554 ATP6V1C2Q8NEY4 427 aa12.34□□□□□ -0.43
RAB40B-204ENST00000571554 SFXN5Q8TD22 340 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms