RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 PPA1Q15181 289 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 RAB35Q15286 201 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 PLPPR5Q32ZL2 321 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 GRAMD1BQ3KR37 738 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 TUSC5Q8IXB3 177 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 OR2L13Q8N349 312 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 ZNF483Q8TF39 744 aaPredicted RBP11.05□□□□□ -0.64
SNX29-207ENST00000568949 C16orf78Q8WTQ4 265 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 FAM168AQ92567 244 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 MUCL1Q96DR8 90 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 NPAS1Q99742 590 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 ERP44Q9BS26 406 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 TIGARQ9NQ88 270 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 MED17Q9NVC6 651 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 GRID1Q9ULK0 1009 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 KCNS2Q9ULS6 477 aa11.05□□□□□ -0.64
SNX29-207ENST00000568949 FAM187AA6NFU0 413 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 ZNF814B7Z6K7 855 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 H7C417 338 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 MANBAO00462 879 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 PPP6CO00743 305 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 ABCD4O14678 606 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 NDUFB5O43674 189 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 PRKD3O94806 890 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 KCNH1O95259 989 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 NTN1O95631 604 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 KRT6AP02538 564 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 KRT6BP04259 564 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 YES1P07947 543 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 HNF1AP20823 631 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 PTNP21246 168 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 GABRA3P34903 492 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 MAGEA4P43358 317 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 KRT6CP48668 564 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 ZNF41P51814 821 aaPredicted RBP11.04□□□□□ -0.64
SNX29-207ENST00000568949 NCBP2P52298 156 aaKnown RBP eCLIP11.04□□□□□ -0.64
SNX29-207ENST00000568949 LSM11P83369 360 aaKnown RBP eCLIP11.04□□□□□ -0.64
SNX29-207ENST00000568949 SPIN4Q56A73 249 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 TIMM23BQ5SRD1 257 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 FAM166AQ6J272 317 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 GALNT18Q6P9A2 607 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 TMEM107Q6UX40 140 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 Q6ZSR9 355 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 Q6ZT83 130 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 P2RY8Q86VZ1 359 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 LILRA2Q8N149 483 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 PLD6Q8N2A8 252 aaKnown RBP11.04□□□□□ -0.64
SNX29-207ENST00000568949 ZNF525Q8N782 197 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 POC1BQ8TC44 478 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 C10orf105Q8TEF2 133 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 SLC9A6Q92581 669 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 DHRS9Q9BPW9 319 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 C1QTNF3Q9BXJ4 246 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 VPS11Q9H270 941 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 DPH5Q9H2P9 285 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 TMEM185BQ9H7F4 350 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 MANSC1Q9H8J5 431 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 DDX18Q9NVP1 670 aaKnown RBP11.04□□□□□ -0.64
SNX29-207ENST00000568949 TAS2R7Q9NYW3 318 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 GRHL1Q9NZI5 618 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 DMGDHQ9UI17 866 aaKnown RBP11.04□□□□□ -0.64
SNX29-207ENST00000568949 MGAT4BQ9UQ53 548 aa11.04□□□□□ -0.64
SNX29-207ENST00000568949 OR4F21O95013 312 aa11.03□□□□□ -0.64
SNX29-207ENST00000568949 IGKV1D-16P01601 117 aa11.03□□□□□ -0.64
SNX29-207ENST00000568949 JUNP05412 331 aaKnown RBP11.03□□□□□ -0.64
SNX29-207ENST00000568949 IFI6P09912 130 aa11.03□□□□□ -0.64
SNX29-207ENST00000568949 CHN1P15882 459 aa11.03□□□□□ -0.64
SNX29-207ENST00000568949 DDCP20711 480 aa11.03□□□□□ -0.64
SNX29-207ENST00000568949 TIA1P31483 386 aaKnown RBP eCLIP11.03□□□□□ -0.64
SNX29-207ENST00000568949 EIF1P41567 113 aaKnown RBP11.03□□□□□ -0.64
SNX29-207ENST00000568949 MANFP55145 182 aaKnown RBP11.03□□□□□ -0.64
SNX29-207ENST00000568949 CDH13P55290 713 aa11.03□□□□□ -0.64
SNX29-207ENST00000568949 SLC18A2Q05940 514 aa11.03□□□□□ -0.64
SNX29-207ENST00000568949 ACSM2AQ08AH3 577 aa11.03□□□□□ -0.64
SNX29-207ENST00000568949 SQLEQ14534 574 aa11.03□□□□□ -0.64
SNX29-207ENST00000568949 SLC29A2Q14542 456 aa11.03□□□□□ -0.64
SNX29-207ENST00000568949 STK11Q15831 433 aa11.03□□□□□ -0.64
SNX29-207ENST00000568949 TCHHL1Q5QJ38 904 aaPredicted RBP11.03□□□□□ -0.64
SNX29-207ENST00000568949 FAM120AOSQ5T036 256 aa11.03□□□□□ -0.64
SNX29-207ENST00000568949 ACSM2BQ68CK6 577 aa11.03□□□□□ -0.64
SNX29-207ENST00000568949 RPS27LQ71UM5 84 aaKnown RBP11.03□□□□□ -0.64
SNX29-207ENST00000568949 FCRLAQ7L513 359 aa11.03□□□□□ -0.64
SNX29-207ENST00000568949 FBXL14Q8N1E6 418 aa11.03□□□□□ -0.64
SNX29-207ENST00000568949 SLC43A2Q8N370 569 aa11.03□□□□□ -0.64
SNX29-207ENST00000568949 CEP112Q8N8E3 955 aa11.03□□□□□ -0.64
SNX29-207ENST00000568949 CDYL2Q8N8U2 506 aa11.03□□□□□ -0.64
SNX29-207ENST00000568949 OR4C3Q8NH37 302 aa11.03□□□□□ -0.64
SNX29-207ENST00000568949 ELP4Q96EB1 424 aa11.03□□□□□ -0.64
SNX29-207ENST00000568949 SRXN1Q9BYN0 137 aa11.03□□□□□ -0.64
SNX29-207ENST00000568949 ACPTQ9BZG2 426 aa11.03□□□□□ -0.64
SNX29-207ENST00000568949 SIRT5Q9NXA8 310 aa11.03□□□□□ -0.64
SNX29-207ENST00000568949 ZNF225Q9UK10 706 aa11.03□□□□□ -0.64
SNX29-207ENST00000568949 HEATR1Q9H583 2144 aaKnown RBP11.02□□□□□ -0.64
SNX29-207ENST00000568949 GXYLT2A0PJZ3 443 aa11.02□□□□□ -0.65
SNX29-207ENST00000568949 GJE1A6NN92 205 aa11.02□□□□□ -0.65
SNX29-207ENST00000568949 E7EQL1 145 aa11.02□□□□□ -0.65
SNX29-207ENST00000568949 ULK1O75385 1050 aa11.02□□□□□ -0.65
SNX29-207ENST00000568949 LYZL6O75951 148 aa11.02□□□□□ -0.65
SNX29-207ENST00000568949 PGM3O95394 542 aa11.02□□□□□ -0.65
SNX29-207ENST00000568949 OXSR1O95747 527 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms