RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 LIN28AQ9H9Z2 209 aaKnown RBP3.33□□□□□ -1.88
SHCBP1-206ENST00000567698 ABCB10Q9NRK6 738 aa3.33□□□□□ -1.88
SHCBP1-206ENST00000567698 MRPL39Q9NYK5 338 aaKnown RBP3.33□□□□□ -1.88
SHCBP1-206ENST00000567698 WRAP73Q9P2S5 460 aaPredicted RBP3.33□□□□□ -1.88
SHCBP1-206ENST00000567698 ONECUT1Q9UBC0 465 aa3.33□□□□□ -1.88
SHCBP1-206ENST00000567698 SMC3Q9UQE7 1217 aa3.33□□□□□ -1.88
SHCBP1-206ENST00000567698 PDE10AQ9Y233 779 aa3.33□□□□□ -1.88
SHCBP1-206ENST00000567698 LOC100131303A0A0U1RQF7 123 aa3.32□□□□□ -1.88
SHCBP1-206ENST00000567698 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.32□□□□□ -1.88
SHCBP1-206ENST00000567698 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.32□□□□□ -1.88
SHCBP1-206ENST00000567698 K7EPI3 171 aa3.32□□□□□ -1.88
SHCBP1-206ENST00000567698 WWP2O00308 870 aa3.32□□□□□ -1.88
SHCBP1-206ENST00000567698 HDAC3O15379 428 aa3.32□□□□□ -1.88
SHCBP1-206ENST00000567698 STX7O15400 261 aaKnown RBP3.32□□□□□ -1.88
SHCBP1-206ENST00000567698 JAK2O60674 1132 aa3.32□□□□□ -1.88
SHCBP1-206ENST00000567698 NEBLO76041 1014 aa3.32□□□□□ -1.88
SHCBP1-206ENST00000567698 PGK1P00558 417 aa3.32□□□□□ -1.88
SHCBP1-206ENST00000567698 F10P00742 488 aa3.32□□□□□ -1.88
SHCBP1-206ENST00000567698 KRT6BP04259 564 aa3.32□□□□□ -1.88
SHCBP1-206ENST00000567698 NCF1P14598 390 aaPredicted RBP3.32□□□□□ -1.88
SHCBP1-206ENST00000567698 KRT6CP48668 564 aa3.32□□□□□ -1.88
SHCBP1-206ENST00000567698 MRPS11P82912 194 aaKnown RBP3.32□□□□□ -1.88
SHCBP1-206ENST00000567698 PAGE2BQ5JRK9 111 aa3.32□□□□□ -1.88
SHCBP1-206ENST00000567698 CENPUQ71F23 418 aa3.32□□□□□ -1.88
SHCBP1-206ENST00000567698 FADS6Q8N9I5 356 aa3.32□□□□□ -1.88
SHCBP1-206ENST00000567698 ZSCAN4Q8NAM6 433 aaPredicted RBP3.32□□□□□ -1.88
SHCBP1-206ENST00000567698 OR2A12Q8NGT7 310 aa3.32□□□□□ -1.88
SHCBP1-206ENST00000567698 TBC1D31Q96DN5 1066 aa3.32□□□□□ -1.88
SHCBP1-206ENST00000567698 C4orf36Q96KX1 117 aa3.32□□□□□ -1.88
SHCBP1-206ENST00000567698 MAPKAP1Q9BPZ7 522 aa3.32□□□□□ -1.88
SHCBP1-206ENST00000567698 COQ10BQ9H8M1 238 aa3.32□□□□□ -1.88
SHCBP1-206ENST00000567698 MEAF6Q9HAF1 191 aa3.32□□□□□ -1.88
SHCBP1-206ENST00000567698 XPO7Q9UIA9 1087 aaKnown RBP3.32□□□□□ -1.88
SHCBP1-206ENST00000567698 ANGPTL2Q9UKU9 493 aa3.32□□□□□ -1.88
SHCBP1-206ENST00000567698 CARMIL1Q5VZK9 1371 aa3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 HAT1O14929 419 aa3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 CLDN3O15551 220 aa3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 HBQ1P09105 142 aa3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 IGLL1P15814 213 aa3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 DLSTP36957 453 aa3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 MAGEA5P43359 124 aa3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 RGRP47804 291 aa3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 TRPC1P48995 793 aa3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 RGS19P49795 217 aa3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 OTUD4Q01804 1114 aaKnown RBP3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 PRKCEQ02156 737 aa3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 RGS1Q08116 209 aa3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 LAGE3Q14657 143 aa3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 TMEM41BQ5BJD5 291 aa3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 ZNF658Q5TYW1 1059 aaPredicted RBP3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 WSCD1Q658N2 575 aa3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 TRPM8Q7Z2W7 1104 aa3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 KRTAP11-1Q8IUC1 163 aa3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 LINC01006Q8NI28 216 aa3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 CNIH3Q8TBE1 160 aa3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 TRUB1Q8WWH5 349 aaKnown RBP3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 FRAT1Q92837 279 aaPredicted RBP3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 ZNF184Q99676 751 aaPredicted RBP3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 PPDPFQ9H3Y8 114 aa3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 WDR76Q9H967 626 aa3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 POLD4Q9HCU8 107 aa3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 PAK1IP1Q9NWT1 392 aaPredicted RBP3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 RDH8Q9NYR8 311 aa3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 CRLS1Q9UJA2 301 aa3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 TMCC3Q9ULS5 477 aa3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 ABCG2Q9UNQ0 655 aa3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 AURKCQ9UQB9 309 aa3.31□□□□□ -1.88
SHCBP1-206ENST00000567698 ATP10DQ9P241 1426 aa3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 PP2D1A8MPX8 630 aa3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 SMPD2O60906 423 aa3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 B3GALNT1O75752 331 aa3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 IFNB1P01574 187 aa3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 SEMG1P04279 462 aa3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 CCDC166P0CW27 439 aa3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 ATP5A1P25705 553 aaKnown RBP3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 ADORA2BP29275 332 aa3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 UGT1A3P35503 534 aa3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 GNPDA1P46926 289 aa3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 RPL29P47914 159 aaKnown RBP3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 P2RY4P51582 365 aa3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 NAPAP54920 295 aa3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 DIO3P55073 304 aa3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 NTHL1P78549 312 aa3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 OC90Q02509 493 aaPredicted RBP3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 SLC5A12Q1EHB4 618 aa3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 OR5M10Q6IEU7 315 aa3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 OR8G2PQ6IF36 304 aa3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 MOB1BQ7L9L4 216 aa3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 ZNF573Q86YE8 665 aa3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 ZBTB44Q8NCP5 570 aa3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 OSTF1Q92882 214 aa3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 CELF6Q96J87 481 aaKnown RBP3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 MYCBPQ99417 103 aaPredicted RBP3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 MCHR1Q99705 422 aa3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 GPA33Q99795 319 aa3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 RNF126Q9BV68 326 aa3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 CHIAQ9BZP6 476 aa3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 NMUR2Q9GZQ4 415 aa3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 POLE3Q9NRF9 147 aa3.3□□□□□ -1.88
SHCBP1-206ENST00000567698 HPF1Q9NWY4 346 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms