RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 SERTAD2Q14140 314 aa15.21■□□□□ 0.03
LINC00554-201ENST00000564841 HIST2H2AA3Q6FI13 130 aa15.21■□□□□ 0.03
LINC00554-201ENST00000564841 SFXN4Q6P4A7 337 aa15.21■□□□□ 0.03
LINC00554-201ENST00000564841 COMMD6Q7Z4G1 85 aa15.21■□□□□ 0.03
LINC00554-201ENST00000564841 TRMT11Q7Z4G4 463 aaKnown RBP15.21■□□□□ 0.03
LINC00554-201ENST00000564841 OR1S1Q8NH92 325 aa15.21■□□□□ 0.03
LINC00554-201ENST00000564841 FCRL4Q96PJ5 515 aa15.21■□□□□ 0.03
LINC00554-201ENST00000564841 SLC38A3Q99624 504 aa15.21■□□□□ 0.03
LINC00554-201ENST00000564841 ZNF649Q9BS31 505 aa15.21■□□□□ 0.03
LINC00554-201ENST00000564841 DDX31Q9H8H2 851 aaKnown RBP15.21■□□□□ 0.03
LINC00554-201ENST00000564841 KCNK12Q9HB15 430 aa15.21■□□□□ 0.03
LINC00554-201ENST00000564841 SH2B3Q9UQQ2 575 aa15.21■□□□□ 0.03
LINC00554-201ENST00000564841 IRAK3Q9Y616 596 aa15.21■□□□□ 0.03
LINC00554-201ENST00000564841 TRABD2BA6NFA1 517 aa15.21■□□□□ 0.02
LINC00554-201ENST00000564841 SOCS6O14544 535 aa15.21■□□□□ 0.02
LINC00554-201ENST00000564841 KLK1P06870 262 aa15.21■□□□□ 0.02
LINC00554-201ENST00000564841 ADRB1P08588 477 aa15.21■□□□□ 0.02
LINC00554-201ENST00000564841 XPAP23025 273 aaPredicted RBP15.21■□□□□ 0.02
LINC00554-201ENST00000564841 VIPR2P41587 438 aa15.21■□□□□ 0.02
LINC00554-201ENST00000564841 STXBP1P61764 594 aaKnown RBP15.21■□□□□ 0.02
LINC00554-201ENST00000564841 CDK5Q00535 292 aa15.21■□□□□ 0.02
LINC00554-201ENST00000564841 FAM209BQ5JX69 171 aa15.21■□□□□ 0.02
LINC00554-201ENST00000564841 FAM74A1Q5RGS3 127 aa15.21■□□□□ 0.02
LINC00554-201ENST00000564841 HBMQ6B0K9 141 aa15.21■□□□□ 0.02
LINC00554-201ENST00000564841 ARL9Q6T311 187 aa15.21■□□□□ 0.02
LINC00554-201ENST00000564841 Q6ZVL8 140 aa15.21■□□□□ 0.02
LINC00554-201ENST00000564841 OR11G2Q8NGC1 345 aa15.21■□□□□ 0.02
LINC00554-201ENST00000564841 OR2AP1Q8NGE2 309 aa15.21■□□□□ 0.02
LINC00554-201ENST00000564841 SPPL3Q8TCT6 385 aa15.21■□□□□ 0.02
LINC00554-201ENST00000564841 UBL7Q96S82 380 aaPredicted RBP15.21■□□□□ 0.02
LINC00554-201ENST00000564841 SLC6A16Q9GZN6 736 aa15.21■□□□□ 0.02
LINC00554-201ENST00000564841 GULP1Q9UBP9 304 aa15.21■□□□□ 0.02
LINC00554-201ENST00000564841 MRTO4Q9UKD2 239 aaKnown RBP15.21■□□□□ 0.02
LINC00554-201ENST00000564841 GON4LQ3T8J9 2241 aa15.21■□□□□ 0.02
LINC00554-201ENST00000564841 NPIPB8E9PQR5 432 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 KLHL18O94889 574 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 FURINP09958 794 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 NFYAP23511 347 aaPredicted RBP15.2■□□□□ 0.02
LINC00554-201ENST00000564841 FNTBP49356 437 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 SLC7A9P82251 487 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 CDKN3Q16667 212 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 ZNF613Q6PF04 617 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 RPTNQ6XPR3 784 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 SLC36A4Q6YBV0 504 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 OR51G2Q8NGK0 314 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 KLK6Q92876 244 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 OR1F2PQ96R84 312 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 TTTY10Q9BZA0 68 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 B4GALT6Q9UBX8 382 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 MCRIP1C9JLW8 97 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 GPR37L1O60883 481 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 ATG12O94817 140 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 SPDEFO95238 335 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 UCHL1P09936 223 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 NPR2P20594 1047 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 SERPINA4P29622 427 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 SLC3A1Q07837 685 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 SYPL1Q16563 259 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 BTN2A1Q7KYR7 527 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 RRM2BQ7LG56 351 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 KRT78Q8N1N4 520 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 SIRT6Q8N6T7 355 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 OR52B4Q8NGK2 314 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 ARL6Q9H0F7 186 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 MAN2C1Q9NTJ4 1040 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 TEX10Q9NXF1 929 aaPredicted RBP15.2■□□□□ 0.02
LINC00554-201ENST00000564841 MYO15AQ9UKN7 3530 aa15.2■□□□□ 0.02
LINC00554-201ENST00000564841 TRBV5-4A0A0C4DH59 114 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 ANTXRLA6NF34 631 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 ARPC1BO15143 372 aaKnown RBP15.19■□□□□ 0.02
LINC00554-201ENST00000564841 B4GALT2O60909 372 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 ACP5P13686 325 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 ANXA7P20073 488 aaKnown RBP15.19■□□□□ 0.02
LINC00554-201ENST00000564841 MAOBP27338 520 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 RBMS1P29558 406 aaKnown RBP15.19■□□□□ 0.02
LINC00554-201ENST00000564841 PDSS1Q5T2R2 415 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 SMARCD3Q6STE5 483 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 IL17RCQ8NAC3 791 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 OR5D16Q8NGK9 328 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 FIBINQ8TAL6 211 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 NARS2Q96I59 477 aaKnown RBP15.19■□□□□ 0.02
LINC00554-201ENST00000564841 QRSL1Q9H0R6 528 aaKnown RBP15.19■□□□□ 0.02
LINC00554-201ENST00000564841 MED20Q9H944 212 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 ZNF69Q9UC07 566 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 SEC14L3Q9UDX4 400 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 EXOSC1Q9Y3B2 195 aaKnown RBP15.19■□□□□ 0.02
LINC00554-201ENST00000564841 MRPS23Q9Y3D9 190 aaKnown RBP15.19■□□□□ 0.02
LINC00554-201ENST00000564841 KLF2Q9Y5W3 355 aaPredicted RBP15.19■□□□□ 0.02
LINC00554-201ENST00000564841 TRAV20A0A0B4J274 112 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 AIPO00170 330 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 RNF13O43567 381 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 SUSD5O60279 629 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 CA3P07451 260 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 NSG1P42857 185 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 AP1S1P61966 158 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 MINDY4Q4G0A6 757 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 TCEAL5Q5H9L2 206 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 C2CD4CQ8TF44 421 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 ZDHHC1Q8WTX9 485 aa15.19■□□□□ 0.02
LINC00554-201ENST00000564841 ARMC5Q96C12 935 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms