RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 NCF4Q15080 339 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 CT45A2Q5DJT8 189 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 ARHGAP22Q7Z5H3 698 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 TOR1AIP2Q8NFQ8 470 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 OR52I1Q8NGK6 324 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 DPH1Q9BZG8 443 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 OR10A5Q9H207 317 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 ATP13A2Q9NQ11 1180 aa17.68■□□□□ 0.42
SMPD3-203ENST00000563226 TESQ9UGI8 421 aaKnown RBP17.68■□□□□ 0.42
SMPD3-203ENST00000563226 CSO75390 466 aaKnown RBP17.67■□□□□ 0.42
SMPD3-203ENST00000563226 ALAS2P22557 587 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 GAS1P54826 345 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 HSD11B2P80365 405 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 ZNF829Q3KNS6 432 aaPredicted RBP17.67■□□□□ 0.42
SMPD3-203ENST00000563226 ZNF615Q8N8J6 731 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 OR1L3Q8NH93 324 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 GRHL3Q8TE85 626 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 TMEM239Q8WW34 195 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 PMM1Q92871 262 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 ZHX1-C8orf76Q96EF9 292 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 RNF31Q96EP0 1072 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 PTCHD1Q96NR3 888 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 OPALINQ96PE5 141 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 YIPF2Q9BWQ6 316 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 DNAJB12Q9NXW2 375 aaKnown RBP17.67■□□□□ 0.42
SMPD3-203ENST00000563226 FLRT3Q9NZU0 649 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 PCDHGA3Q9Y5H0 932 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 FER1L5A0AVI2 2057 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 LOC100506127A0A0U1RQW1 187 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 DUX1O43812 170 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 FMO6PO60774 539 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 GLB1P16278 677 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 FXYD6P3P58550 94 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 SSX1Q16384 188 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 ZNF321PQ8N8H1 164 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 OSTF1Q92882 214 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 SAMD8Q96LT4 415 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 LMF1Q96S06 567 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 POLR2J2Q9GZM3 115 aaKnown RBP17.67■□□□□ 0.42
SMPD3-203ENST00000563226 DCSTAMPQ9H295 470 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 NLGN3Q9NZ94 848 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 OSGIN1Q9UJX0 560 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 CDH10Q9Y6N8 788 aa17.67■□□□□ 0.42
SMPD3-203ENST00000563226 SEC16AO15027 2179 aa17.66■□□□□ 0.42
SMPD3-203ENST00000563226 CACNA1EQ15878 2313 aa17.66■□□□□ 0.42
SMPD3-203ENST00000563226 ARHGAP33O14559 1287 aa17.66■□□□□ 0.42
SMPD3-203ENST00000563226 SLC2A10O95528 541 aa17.66■□□□□ 0.42
SMPD3-203ENST00000563226 ZGLP1P0C6A0 271 aa17.66■□□□□ 0.42
SMPD3-203ENST00000563226 FOLR1P15328 257 aa17.66■□□□□ 0.42
SMPD3-203ENST00000563226 EFNA3P52797 238 aa17.66■□□□□ 0.42
SMPD3-203ENST00000563226 PGGHGQ32M88 737 aa17.66■□□□□ 0.42
SMPD3-203ENST00000563226 ATCAYQ86WG3 371 aa17.66■□□□□ 0.42
SMPD3-203ENST00000563226 TSLPQ969D9 159 aa17.66■□□□□ 0.42
SMPD3-203ENST00000563226 BORCS5Q969J3 196 aa17.66■□□□□ 0.42
SMPD3-203ENST00000563226 HSPBAP1Q96EW2 488 aa17.66■□□□□ 0.42
SMPD3-203ENST00000563226 SLC38A2Q96QD8 506 aa17.66■□□□□ 0.42
SMPD3-203ENST00000563226 CENPOQ9BU64 300 aa17.66■□□□□ 0.42
SMPD3-203ENST00000563226 SLIRPQ9GZT3 109 aaKnown RBP17.66■□□□□ 0.42
SMPD3-203ENST00000563226 CARD8Q9Y2G2 431 aa17.66■□□□□ 0.42
SMPD3-203ENST00000563226 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.65■□□□□ 0.42
SMPD3-203ENST00000563226 NPIPB9F8W1W9 429 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 SURF4O15260 269 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 RPLP0P05388 317 aaKnown RBP17.65■□□□□ 0.42
SMPD3-203ENST00000563226 HBQ1P09105 142 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 IFI30P13284 250 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 ACAA2P42765 397 aaKnown RBP17.65■□□□□ 0.42
SMPD3-203ENST00000563226 ARL4DP49703 201 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 LIMK1P53667 647 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 RHAGQ02094 409 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 DGUOKQ16854 277 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 NDUFAF6Q330K2 333 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 HSDL2Q6YN16 418 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 ADCK1Q86TW2 530 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 BCORP1Q8N888 145 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 ZSCAN1Q8NBB4 408 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 ANKK1Q8NFD2 765 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 SH3YL1Q96HL8 342 aaPredicted RBP17.65■□□□□ 0.42
SMPD3-203ENST00000563226 CHCHD6Q9BRQ6 235 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 TAPBPLQ9BX59 468 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 ENKD1Q9H0I2 346 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 Q9N2J8 555 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 ERGIC3Q9Y282 383 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 C17orf105B2RV13 164 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 PRODHO43272 600 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 RFPL3O75679 317 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 SOX3P41225 446 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 PLXDC1Q8IUK5 500 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 D2HGDHQ8N465 521 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 NANOGP1Q8N7R0 232 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 DTNBP1Q96EV8 351 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 ELF4Q99607 663 aaPredicted RBP17.65■□□□□ 0.42
SMPD3-203ENST00000563226 ZNF559Q9BR84 538 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 NUDT22Q9BRQ3 303 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 ERVMER34-1Q9H9K5 563 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 HHATLQ9HCP6 504 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 MUTYHQ9UIF7 546 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 DIMT1Q9UNQ2 313 aaKnown RBP17.65■□□□□ 0.42
SMPD3-203ENST00000563226 CSNK1G3Q9Y6M4 447 aa17.65■□□□□ 0.42
SMPD3-203ENST00000563226 PI4KAP42356 2102 aa17.64■□□□□ 0.42
SMPD3-203ENST00000563226 MN1Q10571 1320 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms