RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 TRAM2Q15035 370 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 MICAQ29983 383 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 FGD3Q5JSP0 725 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 DCST1Q5T197 706 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 OPN5Q6U736 354 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 PLEKHM3Q6ZWE6 761 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 DTX1Q86Y01 620 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 RBM45Q8IUH3 476 aaKnown RBP9.48□□□□□ -0.89
USP3-219ENST00000561326 DND1Q8IYX4 353 aaKnown RBP9.48□□□□□ -0.89
USP3-219ENST00000561326 PRR22Q8IZ63 422 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 SLC5A8Q8N695 610 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 OR4D11Q8NGI4 311 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 OR52J3Q8NH60 311 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 PRRC1Q96M27 445 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 RDH12Q96NR8 316 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 ALPK1Q96QP1 1244 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 MESP1Q9BRJ9 268 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 OSBPL11Q9BXB4 747 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 RSPO3Q9BXY4 272 aaPredicted RBP9.48□□□□□ -0.89
USP3-219ENST00000561326 TRIM2Q9C040 744 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 ANKRD19PQ9H560 264 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 LIN28AQ9H9Z2 209 aaKnown RBP9.48□□□□□ -0.89
USP3-219ENST00000561326 ZNF556Q9HAH1 456 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 ASCL3Q9NQ33 180 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 P4HTMQ9NXG6 502 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 USE1Q9NZ43 259 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 SELENONQ9NZV5 590 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 KIF17Q9P2E2 1029 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 TESQ9UGI8 421 aaKnown RBP9.48□□□□□ -0.89
USP3-219ENST00000561326 FBXL4Q9UKA2 621 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 ACAD8Q9UKU7 415 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 RAB26Q9ULW5 256 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 A4GNTQ9UNA3 340 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 C15orf41Q9Y2V0 281 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 LYVE1Q9Y5Y7 322 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 SPEGQ15772 3267 aa9.48□□□□□ -0.89
USP3-219ENST00000561326 MED13Q9UHV7 2174 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 TRAPPC13A5PLN9 417 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 CLDN24A6NM45 220 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 CPSF4LA6NMK7 179 aaKnown RBP9.47□□□□□ -0.89
USP3-219ENST00000561326 J3KTA2 159 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 TP53I11O14683 189 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 TERTO14746 1132 aaKnown RBP9.47□□□□□ -0.89
USP3-219ENST00000561326 FFAR1O14842 300 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 ZNF264O43296 627 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 NDUFB5O43674 189 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 EIF4E2O60573 245 aaKnown RBP9.47□□□□□ -0.89
USP3-219ENST00000561326 OR2J2O76002 312 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 CCNB2O95067 398 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 EPPINO95925 133 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 ALPLP05186 524 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 SERPINA7P05543 415 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 LINGO3P0C6S8 592 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 LIPCP11150 499 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 PRKACGP22612 351 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 F8A1P23610 371 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 IFNGR2P38484 337 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 IST1P53990 364 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 AQP4P55087 323 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 COPZ1P61923 177 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 PPP1R8Q12972 351 aaKnown RBP9.47□□□□□ -0.89
USP3-219ENST00000561326 PIN1Q13526 163 aaPredicted RBP9.47□□□□□ -0.89
USP3-219ENST00000561326 GANABQ14697 944 aaKnown RBP9.47□□□□□ -0.89
USP3-219ENST00000561326 EXOC3L2Q2M3D2 409 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 ENTPD8Q5MY95 495 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 JMJD6Q6NYC1 403 aaPredicted RBP9.47□□□□□ -0.89
USP3-219ENST00000561326 TMEM179BQ7Z7N9 219 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 ZNF605Q86T29 641 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 RPS19BP1Q86WX3 136 aaKnown RBP9.47□□□□□ -0.89
USP3-219ENST00000561326 MARCH9Q86YJ5 346 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 EPHX4Q8IUS5 362 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 LACC1Q8IV20 430 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 MISPQ8IVT2 679 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 OFCC1Q8IZS5 231 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 DHRSXQ8N5I4 330 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 ATG16L2Q8NAA4 619 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 PHOSPHO1Q8TCT1 267 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 CNOT9Q92600 299 aaKnown RBP9.47□□□□□ -0.89
USP3-219ENST00000561326 SLC38A4Q969I6 547 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 NXPE2Q96DL1 559 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 DHRS1Q96LJ7 313 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 ZNF597Q96LX8 424 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 FER1L6-AS2Q96M78 137 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 LMF1Q96S06 567 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 EXOSC3Q9NQT5 275 aaKnown RBP9.47□□□□□ -0.89
USP3-219ENST00000561326 SDHAF3Q9NRP4 125 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 SMPD3Q9NY59 655 aaPredicted RBP9.47□□□□□ -0.89
USP3-219ENST00000561326 RHCGQ9UBD6 479 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 RPS6KB2Q9UBS0 482 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 ENOPH1Q9UHY7 261 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 CHST2Q9Y4C5 530 aa9.47□□□□□ -0.89
USP3-219ENST00000561326 CENPVL1A0A0U1RR11 272 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 DCDC2BA2VCK2 349 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 ARRDC5A6NEK1 342 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 TMEM200CA6NKL6 621 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 ALG1L2C9J202 215 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 FAAHO00519 579 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 FRS3O43559 492 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 FADS1O60427 444 aa9.46□□□□□ -0.9
USP3-219ENST00000561326 ICOSLGO75144 302 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms